RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TIMP4Q99727 224 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 SLC25A21Q9BQT8 299 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-202ENST00000394820 PLEKHJ1Q9NW61 149 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 PURGQ9UJV8 347 aaKnown RBP11.86□□□□□ -0.51
NFKB1-202ENST00000394820 MEMO1Q9Y316 297 aa11.86□□□□□ -0.51
NFKB1-202ENST00000394820 PRSS44E7EML9 344 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 TGFBR3LH3BV60 316 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 H7C1Q1 480 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 RBMXL2O75526 392 aaKnown RBP11.85□□□□□ -0.51
NFKB1-202ENST00000394820 S100A2P29034 98 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 IKZF1Q13422 519 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 OR52H1Q8NGJ2 320 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 OR14K1Q8NGZ2 314 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 OR51F2Q8NH61 342 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 FOXQ1Q9C009 403 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 TGIF2Q9GZN2 237 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 S1PR5Q9H228 398 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 ZNF576Q9H609 170 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 MRPS28Q9Y2Q9 187 aaKnown RBP11.85□□□□□ -0.51
NFKB1-202ENST00000394820 IGHV5-51A0A0C4DH38 117 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 A6NCN8 305 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 K7EPK0 472 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 SLC17A2O00624 439 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 F10P00742 488 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 IL5P05113 134 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 EPHA1P21709 976 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 SLC26A5P58743 744 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 SRSF3P84103 164 aaKnown RBP11.85□□□□□ -0.51
NFKB1-202ENST00000394820 C9orf135Q5VTT2 229 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 NPSR1Q6W5P4 371 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.85□□□□□ -0.51
NFKB1-202ENST00000394820 FAM71E2Q8N5Q1 922 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 SECTM1Q8WVN6 248 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 REEP6Q96HR9 211 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 GFI1Q99684 422 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 NICN1Q9BSH3 213 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 LMF2Q9BU23 707 aaKnown RBP11.85□□□□□ -0.51
NFKB1-202ENST00000394820 TMEM59Q9BXS4 323 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 RHOFQ9HBH0 211 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 CHST11Q9NPF2 352 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 KCNJ16Q9NPI9 418 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 RNF215Q9Y6U7 377 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 OR5K4A6NMS3 321 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 CD53P19397 219 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 RAG2P55895 527 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 NDUFA6P56556 154 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 FZD5Q13467 585 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 RIN1Q13671 783 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 NCMAPQ5T1S8 102 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 RPL7L1Q6DKI1 246 aaKnown RBP11.85□□□□□ -0.51
NFKB1-202ENST00000394820 DNM1P34Q6PK57 102 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 PRR18Q8N4B5 295 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 FAM24BQ8N5W8 94 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 OR5D14Q8NGL3 314 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 OR51B6Q9H340 312 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 TAF9BQ9HBM6 251 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 KLHL13Q9P2N7 655 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 ASH2LQ9UBL3 628 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 PCDHGA1Q9Y5H4 931 aa11.85□□□□□ -0.51
NFKB1-202ENST00000394820 hCG_1809904A0A1W2PP81 198 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 A0A1W2PR64 198 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 A0A1W2PRV1 198 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 TMEM218A2RU14 115 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 TRIM77I1YAP6 450 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 BCL2L11O43521 198 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 B3GALNT1O75752 331 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 SMIM10L1P0DMW3 83 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 RAB32Q13637 225 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 C9orf152Q5JTZ5 239 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 OR2I1PQ8NGU4 316 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 SMIM10Q96HG1 83 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 SLC25A32Q9H2D1 315 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 NPDC1Q9NQX5 325 aaPredicted RBP11.84□□□□□ -0.51
NFKB1-202ENST00000394820 NXT1Q9UKK6 140 aaKnown RBP11.84□□□□□ -0.51
NFKB1-202ENST00000394820 ALPK3Q96L96 1907 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 KLF4O43474 513 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 CD1CP29017 333 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 OR1D5P58170 312 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 PPIAP62937 165 aaKnown RBP11.84□□□□□ -0.51
NFKB1-202ENST00000394820 TSPO2Q5TGU0 170 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 GPBAR1Q8TDU6 330 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 SARGQ9BW04 601 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 CNTD2Q9H8S5 307 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 SHANK1Q9Y566 2161 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 KIAA1549LQ6ZVL6 1849 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 C1QL1O75973 258 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 NKX2-2O95096 273 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 LTBRP36941 435 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 RAB13P51153 203 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 PRSS35Q8N3Z0 413 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 FNDC9Q8TBE3 224 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 SCARF2Q96GP6 870 aaPredicted RBP11.84□□□□□ -0.51
NFKB1-202ENST00000394820 URM1Q9BTM9 101 aaKnown RBP11.84□□□□□ -0.51
NFKB1-202ENST00000394820 SCPEP1Q9HB40 452 aa11.84□□□□□ -0.51
NFKB1-202ENST00000394820 TMEM184BQ9Y519 407 aaPredicted RBP11.84□□□□□ -0.51
NFKB1-202ENST00000394820 MEGF11A6BM72 1044 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 STMND1H3BQB6 276 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 ANGPTL7O43827 346 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 OR2T1O43869 369 aa11.83□□□□□ -0.51
NFKB1-202ENST00000394820 EIF3GO75821 320 aaKnown RBP eCLIP11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms