RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 C9orf170A2RU37 121 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 NUDT21O43809 227 aaKnown RBP14.44□□□□□ -0.1
PCDH1-203ENST00000394536 SCGNO76038 276 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 IL11P20809 199 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 CASRP41180 1078 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 PLAURQ03405 335 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 HSD17B13Q7Z5P4 300 aaPredicted RBP14.44□□□□□ -0.1
PCDH1-203ENST00000394536 CBLN2Q8IUK8 224 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 SULT4A1Q9BR01 284 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 SLC5A6Q9Y289 635 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 CEP250Q9BV73 2442 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 K7EPK0 472 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 LCATP04180 440 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 CSF2RBP32927 897 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 PRSS12P56730 875 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 ZNF273Q14593 569 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 FAM71E2Q8N5Q1 922 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 OR56B1Q8NGI3 324 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 OR5L2Q8NGL0 311 aa14.44□□□□□ -0.1
PCDH1-203ENST00000394536 MRPL38Q96DV4 380 aaKnown RBP14.44□□□□□ -0.1
PCDH1-203ENST00000394536 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.43□□□□□ -0.1
PCDH1-203ENST00000394536 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.43□□□□□ -0.1
PCDH1-203ENST00000394536 RAB5BP61020 215 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 EXD3Q8N9H8 876 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 ADAD2Q8NCV1 583 aaKnown RBP14.43□□□□□ -0.1
PCDH1-203ENST00000394536 TMPRSS13Q9BYE2 586 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 SLC22A11Q9NSA0 550 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 KCNMB2Q9Y691 235 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 DENND4CQ5VZ89 1909 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 FAM221AA4D161 298 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 CAV2P51636 162 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 HERV-K104P61576 105 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 FOXF1Q12946 379 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 FAM122BQ7Z309 247 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 OR10A2Q9H208 303 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 ZNF442Q9H7R0 627 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 CHST11Q9NPF2 352 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 OR2M5A3KFT3 312 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 PLPP3O14495 311 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 RER1O15258 196 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 HOXC4P09017 264 aaPredicted RBP14.43□□□□□ -0.1
PCDH1-203ENST00000394536 OPRM1P35372 400 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 TERB2Q8NHR7 220 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 FLVCR1-AS1Q8TAF5 88 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 FOXQ1Q9C009 403 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 C12orf10Q9HB07 376 aa14.43□□□□□ -0.1
PCDH1-203ENST00000394536 OR8U9P0C7N5 309 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 MPPED2Q15777 294 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 OR1S1Q8NH92 325 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 VN1R1Q9GZP7 353 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 KLK13Q9UKR3 277 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 VSIG4Q9Y279 399 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 ALG1L2C9J202 215 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 C5orf67F2Z3F1 127 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 TNFSF12O43508 249 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 ZNF354AO60765 605 aaPredicted RBP14.42□□□□□ -0.1
PCDH1-203ENST00000394536 TMEM127O75204 238 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 QDPRP09417 244 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 LDAHQ9H6V9 325 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 MRPL22Q9NWU5 206 aaKnown RBP14.42□□□□□ -0.1
PCDH1-203ENST00000394536 FRMPD3Q5JV73 1810 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 BORCS7-ASMTA0A0B4J1R7 106 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 A6NCN8 305 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 ZNF217O75362 1048 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 CHRM2P08172 466 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 OMGP23515 440 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 PNLIPRP2P54317 469 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 MTCP1P56278 107 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 HSD17B11Q8NBQ5 300 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 OR10Z1Q8NGY1 313 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 NICN1Q9BSH3 213 aa14.42□□□□□ -0.1
PCDH1-203ENST00000394536 A0A1W2PPC1 479 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 C1orf196B1AJZ1 125 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 ZNF205O95201 554 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 CD1AP06126 327 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 FOLR1P15328 257 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 GLRA1P23415 457 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 CSNK1A1P48729 337 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 ZNF121P58317 390 aaPredicted RBP14.41□□□□□ -0.1
PCDH1-203ENST00000394536 VAMP2P63027 116 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 RAB30Q15771 203 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 C14orf28Q4W4Y0 310 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 RAB11FIP2Q7L804 512 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 SLC36A1Q7Z2H8 476 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 MARVELD3Q96A59 401 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 SCARF2Q96GP6 870 aaPredicted RBP14.41□□□□□ -0.1
PCDH1-203ENST00000394536 ARHGAP5-AS1Q96IT6 56 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 A0A1B0GX78 115 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 A0A1W2PP11 408 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 CFIP05156 583 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 GLP1RP43220 463 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 PHLDA2Q53GA4 152 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.41□□□□□ -0.1
PCDH1-203ENST00000394536 BIN3Q9NQY0 253 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 ZNF275Q9NSD4 429 aaPredicted RBP14.41□□□□□ -0.1
PCDH1-203ENST00000394536 DKKL1Q9UK85 242 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 RARRES3Q9UL19 164 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 NPTNQ9Y639 398 aa14.41□□□□□ -0.1
PCDH1-203ENST00000394536 SOCS1O15524 211 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms