RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 OTOSQ8NHW6 89 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF420Q8TAQ5 688 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 THEM6Q8WUY1 208 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 RNF133Q8WVZ7 376 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 SPRYD4Q8WW59 207 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 COG8Q96MW5 612 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF582Q96NG8 517 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 OSBPL10Q9BXB5 764 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 TEX12Q9BXU0 123 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 EGLN1Q9GZT9 426 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 S100A14Q9HCY8 104 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 CYSLTR2Q9NS75 346 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF319Q9P2F9 582 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZDHHC8Q9ULC8 765 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 COPS3Q9UNS2 423 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 WIPI2Q9Y4P8 454 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 RTTNQ86VV8 2226 aa6.49□□□□□ -1.37
HMGB3P1-201ENST00000393368 ISPDA4D126 451 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 CD300LBA8K4G0 201 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 IQCF6A8MYZ5 107 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 CLDN25C9JDP6 229 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 J3QW42 95 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 MAGEB4O15481 346 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 TGFAP01135 160 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 ALPLP05186 524 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 CD55P08174 381 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 ADH4P08319 380 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 H2BFMP0C1H6 154 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 TUBG1P23258 451 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 CA6P23280 308 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 LIPAP38571 399 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 GZMKP49863 264 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 MMP16P51512 607 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 TMEM33P57088 247 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 GRB2P62993 217 aaKnown RBP6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 MRPS11P82912 194 aaKnown RBP6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZMAT1Q5H9K5 638 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 SLC35D3Q5M8T2 416 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 AADACL4Q5VUY2 407 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 PRAMEF6Q5VXH4 476 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 PLEKHG7Q6ZR37 379 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 SHFQ7M4L6 423 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 SLC16A9Q7RTY1 509 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 PRSS45Q7RTY3 260 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 MOGAT3Q86VF5 341 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 PRIMA1Q86XR5 153 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 CBR4Q8N4T8 237 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 OR56B2PQ8NGI1 322 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 TMEM163Q8TC26 289 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 UBE2FQ969M7 185 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 REEP6Q96HR9 211 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 MEGF10Q96KG7 1140 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 MBOAT4Q96T53 435 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 CNN2Q99439 309 aaKnown RBP6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 TBX5Q99593 518 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 TEAD3Q99594 435 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 RBM4BQ9BQ04 359 aaKnown RBP6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 SLC30A2Q9BRI3 323 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 GABARAPL3Q9BY60 117 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 PPP1R3EQ9H7J1 279 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 TUBG2Q9NRH3 451 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 UBAP1Q9NZ09 502 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 AASSQ9UDR5 926 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 CGGBP1Q9UFW8 167 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 LAMP5Q9UJQ1 280 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 LRP12Q9Y561 859 aa6.48□□□□□ -1.37
HMGB3P1-201ENST00000393368 DNHD1Q96M86 4753 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 GGT3PA6NGU5 568 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 LMX1BO60663 402 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 CRLF1O75462 422 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 BAG2O95816 211 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 CYB5R3P00387 301 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 ALOX5APP20292 161 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 TNFSF4P23510 183 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 PMELP40967 661 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 SLC15A1P46059 708 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 ALDH3A2P51648 485 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 LMO4P61968 165 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 EFNB1P98172 346 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 MFGE8Q08431 387 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 TIGD6Q17RP2 521 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 FAM201AQ5SY85 155 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 LCN1P1Q5VSP4 162 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 FAM166AQ6J272 317 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZFP1Q6P2D0 407 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 MEPCEQ7L2J0 689 aaKnown RBP6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 SSX6Q7RTT6 188 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 C19orf18Q8NEA5 215 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 OR51G2Q8NGK0 314 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 OR13G1Q8NGZ3 307 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 FAM81AQ8TBF8 368 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 PPP1R14AQ96A00 147 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 SGK3Q96BR1 496 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 PGAM5Q96HS1 289 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 RAB3IPQ96QF0 476 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 SIGLEC11Q96RL6 698 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 DIRC2Q96SL1 478 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 SLC29A1Q99808 456 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 ADAT1Q9BUB4 502 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms