RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 DIRC2Q96SL1 478 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 ISG20L2Q9H9L3 353 aaKnown RBP11.38□□□□□ -0.59
USP44-202ENST00000393091 ACOXLQ9NUZ1 547 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 FRRS1LQ9P0K9 344 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 ERGIC3Q9Y282 383 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 CST4P01036 141 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 MT-ND2P03891 347 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 CPEP16870 476 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 THBS4P35443 961 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 TAF13Q15543 124 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 SNAI3Q3KNW1 292 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 TMEM255AQ5JRV8 349 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 GLYATL3Q5SZD4 288 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 THRSPQ92748 146 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 SMIM19Q96E16 107 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 KCNS3Q9BQ31 491 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 POFUT1Q9H488 388 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 MRPL15Q9P015 296 aaKnown RBP11.38□□□□□ -0.59
USP44-202ENST00000393091 ZNF319Q9P2F9 582 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 CLEC2DQ9UHP7 191 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 STARD10Q9Y365 291 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 TRBV5-5A0A0J9YX44 114 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 TMEM269A0A1B0GVZ9 245 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 H7C417 338 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 SC5DO75845 299 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 CD37P11049 281 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 ACHEP22303 614 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 TNK1Q13470 666 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 TRAM1Q15629 374 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 MSMPQ1L6U9 139 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 ZNF718Q3SXZ3 478 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 OTPQ5XKR4 325 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 XAF1Q6GPH4 301 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 ZNF529Q6P280 563 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 YIPF7Q8N8F6 280 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 SPRYD4Q8WW59 207 aaPredicted RBP11.38□□□□□ -0.59
USP44-202ENST00000393091 PGLYRP3Q96LB9 341 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 TRIM36Q9NQ86 728 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 CHCHD3Q9NX63 227 aaKnown RBP11.38□□□□□ -0.59
USP44-202ENST00000393091 CMAHPQ9Y471 501 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 VSTM5A8MXK1 200 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 SYT6Q5T7P8 510 aaPredicted RBP11.37□□□□□ -0.59
USP44-202ENST00000393091 RGS7BPQ6MZT1 257 aaPredicted RBP11.37□□□□□ -0.59
USP44-202ENST00000393091 UNQ9370/PRO34162Q6UXP9 181 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 LHFPL3Q86UP9 236 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 CELF2-AS1Q8N7Q2 184 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 KLF14Q8TD94 323 aaPredicted RBP11.37□□□□□ -0.59
USP44-202ENST00000393091 FBXW5Q969U6 566 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 ZC3HAV1LQ96H79 300 aaKnown RBP11.37□□□□□ -0.59
USP44-202ENST00000393091 SLC22A4Q9H015 551 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 FAIMQ9NVQ4 179 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 ATE1O95260 518 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 FSTL3O95633 263 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 ANOS1P23352 680 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 TTKP33981 857 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 MMP15P51511 669 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 NANOS3P60323 173 aaKnown RBP11.37□□□□□ -0.59
USP44-202ENST00000393091 FAM3AP98173 230 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 EMX1Q04741 257 aaPredicted RBP11.37□□□□□ -0.59
USP44-202ENST00000393091 MALLQ13021 153 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 DOC2BQ14184 412 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 WDR38Q5JTN6 314 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 TMEM244Q5VVB8 128 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 DOK3Q7L591 496 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 ZNF283Q8N7M2 679 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 TECTBQ96PL2 329 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 CENPMQ9NSP4 180 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 CBLN4Q9NTU7 201 aa11.37□□□□□ -0.59
USP44-202ENST00000393091 NGFP01138 241 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 PSMA1P25786 263 aaKnown RBP11.36□□□□□ -0.59
USP44-202ENST00000393091 SNTB2Q13425 540 aaKnown RBP11.36□□□□□ -0.59
USP44-202ENST00000393091 GK2Q14410 553 aaPredicted RBP11.36□□□□□ -0.59
USP44-202ENST00000393091 TP53I3Q53FA7 332 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 BCL2L15Q5TBC7 163 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 CD200R1LQ6Q8B3 271 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 NAA40Q86UY6 237 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 PHYHIPQ92561 330 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 SGCDQ92629 289 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 GNG8Q9UK08 70 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 NOP16Q9Y3C1 178 aaKnown RBP11.36□□□□□ -0.59
USP44-202ENST00000393091 HRNRQ86YZ3 2850 aaPredicted RBP11.36□□□□□ -0.59
USP44-202ENST00000393091 A0A087WXM4 84 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 LOC110117498-PIK3R3F6TDL0 507 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 PLAUP00749 431 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 CD8AP01732 235 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 MRPS11P82912 194 aaKnown RBP11.36□□□□□ -0.59
USP44-202ENST00000393091 SPHARQ15513 63 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 UTS2BQ765I0 119 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 CSNK2A3Q8NEV1 391 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 OR1J1Q8NGS3 322 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 OR14K1Q8NGZ2 314 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 SLC25A40Q8TBP6 338 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 MUL1Q969V5 352 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 ZNF701Q9NV72 531 aaPredicted RBP11.36□□□□□ -0.59
USP44-202ENST00000393091 SF3B6Q9Y3B4 125 aaKnown RBP11.36□□□□□ -0.59
USP44-202ENST00000393091 APOL3O95236 402 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 SMIM18P0DKX4 95 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 YIF1BQ5BJH7 314 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 TMEM154Q6P9G4 183 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms