RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CAV3P56539 151 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 BCL2L1Q07817 233 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 OGFOD2Q6N063 350 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 TMEM150AQ86TG1 271 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 S100ZQ8WXG8 99 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 BADQ92934 168 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 DLX4Q92988 240 aaPredicted RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 BCL2L14Q9BZR8 327 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 MEGF9Q9H1U4 602 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 RPF2Q9H7B2 306 aaKnown RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 WDR54Q9H977 334 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 Q9HAA7 133 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 XPNPEP1Q9NQW7 623 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 TREX1Q9NSU2 369 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 SLC22A13Q9Y226 551 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 INSL6Q9Y581 213 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 HS3ST3B1Q9Y662 390 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 ABCC3O15438 1527 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 IGHV2-70DA0A0C4DH43 119 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 EXOC1LA0A1B0GW35 172 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 ZNF726A6NNF4 738 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 EVPLLA8MZ36 301 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 AIPO00170 330 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 ATP6V0E1O15342 81 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 H2AFB1P0C5Y9 115 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 FAM157CP0CG43 387 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 PVRP15151 417 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 CA6P23280 308 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 SERPINB5P36952 375 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 CLDN15P56746 228 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 LINC00310P59036 64 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 SRSF6Q13247 344 aaKnown RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 IZUMO4Q1ZYL8 232 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 DCST2Q5T1A1 773 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 OLFML2AQ68BL7 652 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 RTL4Q6ZR62 310 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 Q75L30 129 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 MAPKAPK5-AS1Q8N8E1 139 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 TMEM161BQ8NDZ6 487 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 OR1N2Q8NGR9 330 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 OR6F1Q8NGZ6 308 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 Q8TCH9 128 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 TMEM230Q96A57 120 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 MAGOHBQ96A72 148 aaKnown RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 C11orf49Q9H6J7 331 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 PTGES2Q9H7Z7 377 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 TMEM138Q9NPI0 162 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 C19orf12Q9NSK7 152 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 ELOVL5Q9NYP7 299 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 DKKL1Q9UK85 242 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 SNX24Q9Y343 169 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 SPATA31D1Q6ZQQ2 1576 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 RTL9Q8NET4 1388 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 TRBV9A0A0B4J1U6 114 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 A0A1B0GTH9 108 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 GMNCA6NCL1 334 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 INAFM1C9JVW0 142 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 DPM1O60762 260 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 ALOX12BO75342 701 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 CLDN11O75508 207 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 KHDRBS3O75525 346 aaKnown RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 SERPINA6P08185 405 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 NTSP30990 170 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 VHLP40337 213 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 PLK1P53350 603 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 FAM3AP98173 230 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 RIPPLY1Q0D2K3 151 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 SKP2Q13309 424 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 PKP1Q13835 747 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 DPYSL3Q14195 570 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 RPEL1Q2QD12 228 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 FAM219BQ5XKK7 198 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 GDPD3Q7L5L3 318 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 OR11L1Q8NGX0 322 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 OR52N1Q8NH53 320 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 MCOLN3Q8TDD5 553 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 MARC2Q969Z3 335 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 TSNAXQ99598 290 aaKnown RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 ANAPC13Q9BS18 74 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 MYOZ1Q9NP98 299 aaPredicted RBP3.05□□□□□ -1.92
XRN1-202ENST00000392981 SIGLEC8Q9NYZ4 499 aa3.05□□□□□ -1.92
XRN1-202ENST00000392981 ZNF98A6NK75 572 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 TRIM49D1C9J1S8 452 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 LMO7DNF2Z398 122 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 ISG15P05161 165 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 GATA1P15976 413 aaPredicted RBP3.04□□□□□ -1.92
XRN1-202ENST00000392981 FMO3P31513 532 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 IFNGR2P38484 337 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 TAS2R41P59536 307 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 LAMTOR4Q0VGL1 99 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 SPIN4Q56A73 249 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 PXDC1Q5TGL8 231 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 SLC34A3Q8N130 599 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 ABHD12Q8N2K0 398 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 UBA3Q8TBC4 463 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 FAM173AQ9BQD7 235 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 MND1Q9BWT6 205 aa3.04□□□□□ -1.92
XRN1-202ENST00000392981 SPANXB1Q9NS25 103 aaPredicted RBP3.04□□□□□ -1.92
XRN1-202ENST00000392981 IMPAD1Q9NX62 359 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms