RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 THEM6Q8WUY1 208 aa18.72■□□□□ 0.59
SRM-201ENST00000376957 RNF133Q8WVZ7 376 aa18.72■□□□□ 0.59
SRM-201ENST00000376957 ITLN1Q8WWA0 313 aa18.72■□□□□ 0.59
SRM-201ENST00000376957 ZMYND19Q96E35 227 aaPredicted RBP18.72■□□□□ 0.59
SRM-201ENST00000376957 N6AMT1Q9Y5N5 214 aa18.72■□□□□ 0.59
SRM-201ENST00000376957 NPTNQ9Y639 398 aa18.72■□□□□ 0.59
SRM-201ENST00000376957 CACNG2Q9Y698 323 aa18.72■□□□□ 0.59
SRM-201ENST00000376957 TBX1O43435 398 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 MSMBP08118 114 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 SRD5A1P18405 259 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 CX3CR1P49238 355 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 SNCBQ16143 134 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 AMIGO2Q86SJ2 522 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 TIGD4Q8IY51 512 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 SPICQ8N5J4 248 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 OTOSQ8NHW6 89 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 LRTOMTQ8WZ04 291 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 SOX7Q9BT81 388 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 REPIN1Q9BWE0 567 aaKnown RBP18.71■□□□□ 0.59
SRM-201ENST00000376957 NIPAL2Q9H841 368 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 LAMP5Q9UJQ1 280 aa18.71■□□□□ 0.59
SRM-201ENST00000376957 GMDSO60547 372 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 IRF2P14316 349 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 IGFBP5P24593 272 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 DDOSTP39656 456 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 LMO4P61968 165 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 TIGD6Q17RP2 521 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 KCTD18Q6PI47 426 aaPredicted RBP18.7■□□□□ 0.58
SRM-201ENST00000376957 MUC20Q8N307 709 aaPredicted RBP18.7■□□□□ 0.58
SRM-201ENST00000376957 CELF2-AS1Q8N7Q2 184 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 SPERTQ8NA61 448 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 OR10AD1Q8NGE0 317 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 ERGIC1Q969X5 290 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 TMEM186Q96B77 213 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 GABARAPL1Q9H0R8 117 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 ORC6Q9Y5N6 252 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 TMEM14AQ9Y6G1 99 aa18.7■□□□□ 0.58
SRM-201ENST00000376957 NAV3Q8IVL0 2385 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 TRAV20A0A0B4J274 112 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.69■□□□□ 0.58
SRM-201ENST00000376957 CD300LBA8K4G0 201 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 SBK2P0C263 348 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 ACTR3P61158 418 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 APOFQ13790 326 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 OR8G1Q15617 311 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 CR1LQ2VPA4 569 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 SNAI3Q3KNW1 292 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 KDM4DQ6B0I6 523 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 SLC16A9Q7RTY1 509 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 KLBQ86Z14 1044 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 FTMTQ8N4E7 242 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 OR11L1Q8NGX0 322 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 MEGF10Q96KG7 1140 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 RAB3IPQ96QF0 476 aaPredicted RBP18.69■□□□□ 0.58
SRM-201ENST00000376957 YIPF3Q9GZM5 350 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 OR10A2Q9H208 303 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 SEMA6AQ9H2E6 1030 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 RGCCQ9H4X1 137 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 GCM1Q9NP62 436 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 UBAP1Q9NZ09 502 aa18.69■□□□□ 0.58
SRM-201ENST00000376957 WNT9BO14905 357 aa18.68■□□□□ 0.58
SRM-201ENST00000376957 SRP14P37108 136 aaKnown RBP18.68■□□□□ 0.58
SRM-201ENST00000376957 BTG1P62324 171 aa18.68■□□□□ 0.58
SRM-201ENST00000376957 ZNF92Q03936 586 aa18.68■□□□□ 0.58
SRM-201ENST00000376957 SCGB2A2Q13296 93 aa18.68■□□□□ 0.58
SRM-201ENST00000376957 GLYATL3Q5SZD4 288 aa18.68■□□□□ 0.58
SRM-201ENST00000376957 TEAD3Q99594 435 aa18.68■□□□□ 0.58
SRM-201ENST00000376957 RBM4BQ9BQ04 359 aaKnown RBP18.68■□□□□ 0.58
SRM-201ENST00000376957 HIF1ANQ9NWT6 349 aa18.68■□□□□ 0.58
SRM-201ENST00000376957 MRPL15Q9P015 296 aaKnown RBP18.68■□□□□ 0.58
SRM-201ENST00000376957 DYSFO75923 2080 aa18.68■□□□□ 0.58
SRM-201ENST00000376957 TANC2Q9HCD6 1990 aa18.68■□□□□ 0.58
SRM-201ENST00000376957 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.67■□□□□ 0.582e-7■■■□□ 18.4
SRM-201ENST00000376957 MALRD1Q5VYJ5 2156 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 ANKRD30BLA7E2S9 258 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 SELENOFO60613 162 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 IGHV2-5P01817 119 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 HLA-DPB1P04440 258 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 SLC2A1P11166 492 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 PSKH1P11801 424 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 CPT2P23786 658 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 OPRL1P41146 370 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 NAA10P41227 235 aaPredicted RBP18.67■□□□□ 0.58
SRM-201ENST00000376957 TMEM155Q4W5P6 130 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 SLX4IPQ5VYV7 408 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 KRT77Q7Z794 578 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 PRIMA1Q86XR5 153 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 OR2AE1Q8NHA4 323 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 ASB17Q8WXJ9 295 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 PGAM5Q96HS1 289 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 MROQ9BYG7 248 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 LPAR2Q9HBW0 351 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 DNAJC27Q9NZQ0 273 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 ZNF391Q9UJN7 358 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 OAZ3Q9UMX2 235 aa18.67■□□□□ 0.58
SRM-201ENST00000376957 SONP18583 2426 aaKnown RBP18.66■□□□□ 0.58
SRM-201ENST00000376957 A0A1B0GWJ7 208 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 SLC22A31A6NKX4 558 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 FAM157AC9JC47 383 aa18.66■□□□□ 0.58
SRM-201ENST00000376957 F5H5P2 479 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms