RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 MPDZO75970 2070 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 SPTBN5Q9NRC6 3674 aaKnown RBP7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 A0A0J9YW62 118 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 HMSDA8MTL9 139 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 SERPINE3A8MV23 424 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 TMEM14DPA8MWL7 114 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF736B4DX44 427 aaPredicted RBP7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 C9orf172C9J069 976 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 CDX4O14627 284 aaPredicted RBP7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 AKR7A2O43488 359 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 XRCC2O43543 280 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 ATP6V1G1O75348 118 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 OR2A4O95047 310 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 MPZL1O95297 269 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 SYNGR4O95473 234 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 SERPINA5P05154 406 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 NAT1P18440 290 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 POU3F2P20265 443 aaPredicted RBP7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 DLSTP36957 453 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 SRP9P49458 86 aaKnown RBP7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 TAS2R31P59538 309 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 CD83Q01151 205 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 PMPCAQ10713 525 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 CNN3Q15417 329 aaKnown RBP7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 CSRP2Q16527 193 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 DCAF10Q5QP82 559 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF626Q68DY1 528 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 AAED1Q7RTV5 226 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 PRSS45Q7RTY3 260 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 TMEM17Q86X19 198 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 FTMTQ8N4E7 242 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM89BQ8N5H3 189 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 ADAMTS17Q8TE56 1095 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 CAPSLQ8WWF8 208 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 GIMAP1Q8WWP7 306 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 PSMF1Q92530 271 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 SEH1LQ96EE3 360 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 PGAM5Q96HS1 289 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 OR2A7Q96R45 310 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 DHRS9Q9BPW9 319 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 EDEM2Q9BV94 578 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF436Q9C0F3 470 aaPredicted RBP7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 CHST5Q9GZS9 411 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 TP63Q9H3D4 680 aaPredicted RBP7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 RHOFQ9HBH0 211 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 PNRC2Q9NPJ4 139 aaKnown RBP7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 FSCN3Q9NQT6 498 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 KLK11Q9UBX7 282 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 POU2F3Q9UKI9 436 aa7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 MCTS1Q9ULC4 181 aaKnown RBP7.69□□□□□ -1.18
SNRNP40-202ENST00000373720 RALGAPA1Q6GYQ0 2036 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 DCDC2BA2VCK2 349 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF716A6NP11 495 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 C4orf47A7E2U8 309 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 M0R135 149 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 P2RY10O00398 339 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 SMAD9O15198 467 aaKnown RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 RAD1O60671 282 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 CNOT4O95628 575 aaKnown RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 RAB3DO95716 219 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 FCGR2AP12318 317 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 GTF2F2P13984 249 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 HLA-GP17693 338 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 TUBG1P23258 451 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 CPT2P23786 658 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 AGTR1P30556 359 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 RPS27P42677 84 aaKnown RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF121P58317 390 aaPredicted RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 QRFPP83859 136 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 DHODHQ02127 395 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 OC90Q02509 493 aaPredicted RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 FOXO1Q12778 655 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 MFAP5Q13361 173 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 SF3B4Q15427 424 aaKnown RBP eCLIP7.68□□□□□ -1.182e-8■■■■■ 28
SNRNP40-202ENST00000373720 SURF2Q15527 256 aaPredicted RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 SGCAQ16586 387 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 KRTAP27-1Q3LI81 207 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF260Q3ZCT1 412 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 LIN54Q6MZP7 749 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 SEZ6L2Q6UXD5 910 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 TIPARPQ7Z3E1 657 aaKnown RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 MDGA2Q7Z553 956 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 GGNQ86UU5 652 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 NAA40Q86UY6 237 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 GABRG1Q8N1C3 465 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 UBE2J2Q8N2K1 259 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 ZIC4Q8N9L1 334 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 TMEM178AQ8NBL3 297 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 OR10S1Q8NGN2 331 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 OR10R2Q8NGX6 335 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 OR14K1Q8NGZ2 314 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 OR10AC1Q8NH08 325 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF431Q8TF32 576 aaPredicted RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 SSC4DQ8WTU2 575 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 HAS2Q92819 552 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 NABP1Q96AH0 204 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF799Q96GE5 643 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 THOC3Q96J01 351 aaKnown RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 JSRP1Q96MG2 331 aaPredicted RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 OCSTAMPQ9BR26 566 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms