RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 FAM57BQ71RH2 274 aa25.57■■□□□ 1.68
SSBP3-204ENST00000371320 ZNF416Q9BWM5 594 aa25.57■■□□□ 1.68
SSBP3-204ENST00000371320 HPF1Q9NWY4 346 aa25.57■■□□□ 1.68
SSBP3-204ENST00000371320 FBLN5Q9UBX5 448 aa25.57■■□□□ 1.68
SSBP3-204ENST00000371320 EML6Q6ZMW3 1958 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 ZIC3O60481 467 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 CSN2P05814 226 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 FOLR3P41439 243 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 SEC61A1P61619 476 aaKnown RBP25.56■■□□□ 1.68
SSBP3-204ENST00000371320 DCAF12L2Q5VW00 463 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 PGAP1Q75T13 922 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 ZNF101Q8IZC7 436 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 SPACA5Q96QH8 159 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 SH2D2AQ9NP31 389 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 COL6A3P12111 3177 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 IGHV3-15A0A0B4J1V0 119 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 H3BUI4 141 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 RGS11O94810 467 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 GFOD2Q3B7J2 385 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 CLLU1Q5K131 121 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 MAML2Q8IZL2 1156 aaPredicted RBP25.56■■□□□ 1.68
SSBP3-204ENST00000371320 SFXN2Q96NB2 322 aa25.56■■□□□ 1.68
SSBP3-204ENST00000371320 CFAP54Q96N23 3096 aa25.55■■□□□ 1.68
SSBP3-204ENST00000371320 TMEM14DPA8MWL7 114 aa25.55■■□□□ 1.68
SSBP3-204ENST00000371320 ANOS1P23352 680 aa25.55■■□□□ 1.68
SSBP3-204ENST00000371320 P2RX3P56373 397 aa25.55■■□□□ 1.68
SSBP3-204ENST00000371320 MLF1P58340 268 aa25.55■■□□□ 1.68
SSBP3-204ENST00000371320 LSM6P62312 80 aaKnown RBP25.55■■□□□ 1.68
SSBP3-204ENST00000371320 NKPD1Q17RQ9 610 aa25.55■■□□□ 1.68
SSBP3-204ENST00000371320 RNASE10Q5GAN6 216 aaKnown RBP25.55■■□□□ 1.68
SSBP3-204ENST00000371320 ATPAF1Q5TC12 328 aaPredicted RBP25.55■■□□□ 1.68
SSBP3-204ENST00000371320 CD163Q86VB7 1156 aa25.55■■□□□ 1.68
SSBP3-204ENST00000371320 OR5AS1Q8N127 324 aa25.55■■□□□ 1.68
SSBP3-204ENST00000371320 EDEM2Q9BV94 578 aa25.55■■□□□ 1.68
SSBP3-204ENST00000371320 MYOZ1Q9NP98 299 aaPredicted RBP25.55■■□□□ 1.68
SSBP3-204ENST00000371320 RPS10-NUDT3A0A1W2PQS6 291 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 NPIPA2E9PIF3 369 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 NPIPA3F8WFD2 350 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 MSR1P21757 451 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 RAB14P61106 215 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 B3GNTL1Q67FW5 361 aaPredicted RBP25.54■■□□□ 1.68
SSBP3-204ENST00000371320 DOK3Q7L591 496 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 RNF144BQ7Z419 303 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 C12orf45Q8N5I9 185 aaPredicted RBP25.54■■□□□ 1.68
SSBP3-204ENST00000371320 NUDCD2Q8WVJ2 157 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 NAA11Q9BSU3 229 aaPredicted RBP25.54■■□□□ 1.68
SSBP3-204ENST00000371320 MRPS28Q9Y2Q9 187 aaKnown RBP25.54■■□□□ 1.68
SSBP3-204ENST00000371320 HMSDA8MTL9 139 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 VAMP5O95183 116 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 WDPCPO95876 746 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 GNB3P16520 340 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 CCL1P22362 96 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 GSK3AP49840 483 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 GLIPR1L1Q6UWM5 242 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 GVQW1Q8N7I0 195 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 OR13C8Q8NGS7 320 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 OR10R2Q8NGX6 335 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 TMEM54Q969K7 222 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 NTNG2Q96CW9 530 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 ZNF385AQ96PM9 386 aaKnown RBP25.54■■□□□ 1.68
SSBP3-204ENST00000371320 UCN2Q96RP3 112 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 PRRT1Q99946 306 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 SLX1AQ9BQ83 275 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 SELENOIQ9C0D9 397 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 AUP1Q9Y679 476 aa25.54■■□□□ 1.68
SSBP3-204ENST00000371320 MASP2O00187 686 aa25.53■■□□□ 1.68
SSBP3-204ENST00000371320 ARPC5O15511 151 aa25.53■■□□□ 1.68
SSBP3-204ENST00000371320 ZNF17P17021 662 aa25.53■■□□□ 1.68
SSBP3-204ENST00000371320 PHYHD1Q5SRE7 291 aa25.53■■□□□ 1.68
SSBP3-204ENST00000371320 ZC3H10Q96K80 434 aaKnown RBP25.53■■□□□ 1.68
SSBP3-204ENST00000371320 NUDT16L1Q9BRJ7 211 aaKnown RBP25.53■■□□□ 1.68
SSBP3-204ENST00000371320 CSNK2A1P68400 391 aaPredicted RBP25.52■■□□□ 1.68
SSBP3-204ENST00000371320 CXADRP78310 365 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 RIPPLY1Q0D2K3 151 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 C10orf128Q5T292 105 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 PCNPQ8WW12 178 aaKnown RBP25.52■■□□□ 1.68
SSBP3-204ENST00000371320 ASB13Q8WXK3 278 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 NELFAQ9H3P2 528 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 IFT46Q9NQC8 304 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 SLC2A8Q9NY64 477 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 FXYD6-FXYD2A0A087WZ82 144 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 OR14I1A6ND48 311 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 HCKP08631 526 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 C3P1Q6ZMU1 363 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 OR9K2Q8NGE7 335 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 FXYD6Q9H0Q3 95 aa25.52■■□□□ 1.68
SSBP3-204ENST00000371320 CBR3O75828 277 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 CTSSP25774 331 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 GMFBP60983 142 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 OR52W1Q6IF63 320 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 OR2W3Q7Z3T1 314 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 GJC3Q8NFK1 279 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 PGAM5Q96HS1 289 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 VPS13AQ96RL7 3174 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 OR6C65A6NJZ3 312 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 CHRM2P08172 466 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 OR3A4PP47883 348 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 SLC22A6Q4U2R8 563 aa25.51■■□□□ 1.67
SSBP3-204ENST00000371320 ZNF468Q5VIY5 522 aaPredicted RBP25.51■■□□□ 1.67
SSBP3-204ENST00000371320 C1orf210Q8IVY1 113 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms