RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 NDUFB6O95139 128 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 CLDN14O95500 239 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 IGHMP01871 453 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 TFP02787 698 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 MRPL3P09001 348 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 PGCP20142 388 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 AGAP20933 346 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 DNASE1P24855 282 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 CRABP1P29762 137 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 UQCRC1P31930 480 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 EVI2BP34910 448 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 RBMXP38159 391 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 CAPZBP47756 277 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 AGFG1P52594 562 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 PNLIPRP2P54317 469 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 P2RX3P56373 397 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 ACTBP60709 375 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 ACTG1P63261 375 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 SNTA1Q13424 505 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 CAMK2DQ13557 499 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 ZNF267Q14586 743 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 ZMYND11Q15326 602 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 RBMS2Q15434 407 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 FCN2Q15485 313 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 TOMM34Q15785 309 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 SLC25A35Q3KQZ1 300 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 TP53I3Q53FA7 332 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 TMEM69Q5SWH9 247 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 C6orf183Q5T699 404 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 BCL2L15Q5TBC7 163 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 LINC01590Q5TEZ4 76 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 EEF1A1P5Q5VTE0 462 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 PWWP2BQ6NUJ5 590 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 DEGS2Q6QHC5 323 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 FAM198BQ6UWH4 519 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 GLDNQ6ZMI3 551 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 STAC2Q6ZMT1 411 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 FAM122BQ7Z309 247 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 KMT5CQ86Y97 462 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 DND1Q8IYX4 353 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 UBE2J2Q8N2K1 259 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 CADM2Q8N3J6 435 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 ZNF614Q8N883 585 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 ZNF680Q8NEM1 530 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 SDR9C7Q8NEX9 313 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 OR9A4Q8NGU2 314 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 C16orf52Q8NHV5 167 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 CCDC107Q8WV48 283 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 DAZLQ92904 295 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 CLIP3Q96DZ5 547 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 ZMYND19Q96E35 227 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 ZDHHC12Q96GR4 267 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 ADAD1Q96M93 576 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 ZFP3Q96NJ6 502 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 WWC2-AS2Q96NR7 200 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 OR2A7Q96R45 310 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 TAAR6Q96RI8 345 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 SLC25A21Q9BQT8 299 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 NUDT16L1Q9BRJ7 211 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 GPR87Q9BY21 358 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 SPRTNQ9H040 489 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 C20orf85Q9H1P6 137 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 PPIL3Q9H2H8 161 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 SCPEP1Q9HB40 452 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 GALNT9Q9HCQ5 603 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 HRASLSQ9HDD0 168 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 PDE7BQ9NP56 450 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 NOX4Q9NPH5 578 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 PLSCR3Q9NRY6 295 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 FBXO34Q9NWN3 711 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 FAM30AQ9NZY2 134 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 HCN3Q9P1Z3 774 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 UBQLN2Q9UHD9 624 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 STEAP1Q9UHE8 339 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 MGAT4AQ9UM21 535 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 CHD3Q12873 2000 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 HERC2O95714 4834 aa5.73□□□□□ -1.49
ECHDC1-202ENST00000368289 SPTBP11277 2137 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 TRAV6A0A075B6T7 132 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 TRAV36DV7A0A075B6V5 113 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 SMIM30A4D0T7 59 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 OR6C68A6NDL8 312 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 A6NIZ1 184 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 OR6C65A6NJZ3 312 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 A8MV72 311 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 C21orf140B9A014 251 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 H7C417 338 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 XKRYO14609 159 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 SPRY1O43609 319 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 LANCL1O43813 399 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 KHDRBS3O75525 346 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 UPK3AO75631 287 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 ZFPL1O95159 310 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 AMY1AP04745 511 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 CD2P06729 351 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 CYC1P08574 325 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 ALOX5APP20292 161 aa5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 FKBP2P26885 142 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-202ENST00000368289 CALCRP30988 508 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms