RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 NELFAQ9H3P2 528 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 MRPS18BQ9Y676 258 aaKnown RBP11.39□□□□□ -0.59
VAMP1-201ENST00000361716 TDRD6O60522 2096 aaKnown RBP11.39□□□□□ -0.59
VAMP1-201ENST00000361716 PLXNB3Q9ULL4 1909 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 OR4C45A6NMZ5 311 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 SLC17A2O00624 439 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 DRD3P35462 400 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 OR3A2P47893 321 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 PCP4P48539 62 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 CSNK1EP49674 416 aaKnown RBP11.39□□□□□ -0.59
VAMP1-201ENST00000361716 RPS15AP62244 130 aaKnown RBP11.39□□□□□ -0.59
VAMP1-201ENST00000361716 CYCSP99999 105 aaKnown RBP11.39□□□□□ -0.59
VAMP1-201ENST00000361716 RASGEF1BQ0VAM2 473 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 RHEBQ15382 184 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 PRAMEF8Q5VWM4 474 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 PRAMEF7Q5VXH5 474 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 ZNF550Q7Z398 422 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 PNLDC1Q8NA58 520 aaKnown RBP11.39□□□□□ -0.59
VAMP1-201ENST00000361716 OR4K15Q8NH41 348 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 APOOQ9BUR5 198 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 Q9N2J8 555 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 LANCL2Q9NS86 450 aa11.39□□□□□ -0.59
VAMP1-201ENST00000361716 GDF2Q9UK05 429 aaPredicted RBP11.39□□□□□ -0.59
VAMP1-201ENST00000361716 CCDC163A0A0D9SF12 145 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 UPK3AO75631 287 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 IGHV2-5P01817 119 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 MBP02144 154 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 FOLR2P14207 255 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 TUBG1P23258 451 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 FCGR2CP31995 323 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 BTG2P78543 158 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 GPR18Q14330 331 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 DRAM2Q6UX65 266 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 ADAMTSL4Q6UY14 1074 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 OR1J1Q8NGS3 322 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 THAP3Q8WTV1 239 aaPredicted RBP11.38□□□□□ -0.59
VAMP1-201ENST00000361716 METTL21AQ8WXB1 218 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 RNF122Q9H9V4 155 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 B9D1Q9UPM9 204 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 NUDT19A8MXV4 375 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 ZNF587BE7ETH6 402 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 UBE2KP61086 200 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 HAGHQ16775 308 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 C10orf91Q5T1B1 145 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 TANGO2Q6ICL3 276 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 REC114Q7Z4M0 266 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 PRSS35Q8N3Z0 413 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 DEFB119Q8N690 84 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 OR1E3Q8WZA6 343 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 EDAQ92838 391 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 OR10C1Q96KK4 312 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 C1orf198Q9H425 327 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 FBXL17Q9UF56 701 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 POLR1DQ9Y2S0 133 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 ENTPD2Q9Y5L3 495 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 MPDZO75970 2070 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 SMCO3A2RU48 225 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 TMEM212A6NML5 194 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 EFSO43281 561 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 TRGC2P03986 189 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 CDX1P47902 265 aaPredicted RBP11.38□□□□□ -0.59
VAMP1-201ENST00000361716 RNF4P78317 190 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 BATFQ16520 125 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 CLEC12BQ2HXU8 276 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 IAH1Q2TAA2 248 aaPredicted RBP11.38□□□□□ -0.59
VAMP1-201ENST00000361716 SLC16A9Q7RTY1 509 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 ZNF610Q8N9Z0 462 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 RCBTB1Q8NDN9 531 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 MMABQ96EY8 250 aaPredicted RBP11.38□□□□□ -0.59
VAMP1-201ENST00000361716 MOGAT1Q96PD6 335 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 SERINC2Q96SA4 455 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 ADOQ96SZ5 270 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 C19orf53Q9UNZ5 99 aaPredicted RBP11.38□□□□□ -0.59
VAMP1-201ENST00000361716 ASXL3Q9C0F0 2248 aa11.38□□□□□ -0.59
VAMP1-201ENST00000361716 SDK2Q58EX2 2172 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 A0A0B4J2E0 115 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 A0A1B0GX12 115 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 B4DGG1 531 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 XRCC2O43543 280 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 LMX1BO60663 402 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 CD37P11049 281 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 PPICP45877 212 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 TMEM240Q5SV17 173 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.37□□□□□ -0.59
VAMP1-201ENST00000361716 OR2I1PQ8NGU4 316 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 ADAMTS17Q8TE56 1095 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 ZFYVE21Q9BQ24 234 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 PPIHO43447 177 aaKnown RBP11.37□□□□□ -0.59
VAMP1-201ENST00000361716 SLC16A7O60669 478 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 AHSA1O95433 338 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 RENP00797 406 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 CTSEP14091 401 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 TACR3P29371 465 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 RPL12P30050 165 aaKnown RBP11.37□□□□□ -0.59
VAMP1-201ENST00000361716 CBLN3Q6UW01 205 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 ZNF765Q7L2R6 523 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 LINC00346Q8IVM7 164 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 HPSE2Q8WWQ2 592 aa11.37□□□□□ -0.59
VAMP1-201ENST00000361716 CYYR1Q96J86 154 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms