RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 FABP6P51161 128 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 C2orf76Q3KRA6 126 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 SLC51BQ86UW2 128 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 OR1J1Q8NGS3 322 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 OR52I2Q8NH67 350 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 PAQR8Q8TEZ7 354 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 SEC22AQ96IW7 307 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 DLL4Q9NR61 685 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 KIAA1217Q5T5P2 1943 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 FABP5Q01469 135 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 OPCMLQ14982 345 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 PHLDA2Q53GA4 152 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 KRBOX4Q5JUW0 171 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 SLC25A26Q70HW3 274 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 GABRG1Q8N1C3 465 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 OR51A4Q8NGJ6 313 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 BTF3L4Q96K17 158 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 POLR2AP24928 1970 aaKnown RBP12.12□□□□□ -0.47
LDB3-202ENST00000361373 COL4A1P02462 1669 aa12.12□□□□□ -0.47
LDB3-202ENST00000361373 C1orf196B1AJZ1 125 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 B4E171 279 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 PTAFRP25105 342 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 TSPAN7P41732 249 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 COL13A1Q5TAT6 717 aaPredicted RBP12.11□□□□□ -0.47
LDB3-202ENST00000361373 GPR32P1Q8NGA4 272 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 APOBEC4Q8WW27 367 aaKnown RBP12.11□□□□□ -0.47
LDB3-202ENST00000361373 TRAPPC4Q9Y296 219 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 RAB13P51153 203 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 RAC3P60763 192 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 HTD2P86397 168 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 RTL8BQ17RB0 113 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 OR1S2Q8NGQ3 325 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 GPR119Q8TDV5 335 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 RDH5Q92781 318 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 SIRT3Q9NTG7 399 aaPredicted RBP12.11□□□□□ -0.47
LDB3-202ENST00000361373 QPCTLQ9NXS2 382 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 TAF1LQ8IZX4 1826 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 SLC17A2O00624 439 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 AGPAT2O15120 278 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 FBXO24O75426 580 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 ANXA7P20073 488 aaKnown RBP12.11□□□□□ -0.47
LDB3-202ENST00000361373 DUSP1P28562 367 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 HAAOP46952 286 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 EVX1P49640 407 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 ZNF85Q03923 595 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 OSR2Q8N2R0 312 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 RANGRFQ9HD47 186 aaPredicted RBP12.11□□□□□ -0.47
LDB3-202ENST00000361373 SLC39A9Q9NUM3 307 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 SHANK3Q9BYB0 1731 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 OR5H15A6NDH6 313 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 ZNF354AO60765 605 aaPredicted RBP12.11□□□□□ -0.47
LDB3-202ENST00000361373 SNAPINO95295 136 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 CNIH1O95406 144 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 ADRA2CP18825 462 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 ALOX5APP20292 161 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 PCSK6P29122 969 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 GPR12P47775 334 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 GNG3P63215 75 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 BAXQ07812 192 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 SRSF5Q13243 272 aaKnown RBP12.11□□□□□ -0.47
LDB3-202ENST00000361373 FZD5Q13467 585 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 PRAMEF5Q5TYX0 476 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 PRAMEF6Q5VXH4 476 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 FAM185AQ8N0U4 392 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 ARSGQ96EG1 525 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 LRRC3BQ96PB8 259 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 SF3B5Q9BWJ5 86 aaKnown RBP12.11□□□□□ -0.47
LDB3-202ENST00000361373 FN3KRPQ9HA64 309 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 FBXL2Q9UKC9 423 aa12.11□□□□□ -0.47
LDB3-202ENST00000361373 HMGN3Q15651 99 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 DYNC2LI1Q8TCX1 351 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 RNF141Q8WVD5 230 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 LIN7CQ9NUP9 197 aaKnown RBP12.1□□□□□ -0.47
LDB3-202ENST00000361373 TAS2R5Q9NYW4 299 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 DEFA4P12838 97 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 RPS27P42677 84 aaKnown RBP12.1□□□□□ -0.47
LDB3-202ENST00000361373 NKX2-1P43699 371 aaPredicted RBP12.1□□□□□ -0.47
LDB3-202ENST00000361373 CCR6P51684 374 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 UCNP55089 124 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 OR2I1PQ8NGU4 316 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 OR10K1Q8NGX5 313 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 AKR7LQ8NHP1 331 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 CORO2AQ92828 525 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 PLA2G12AQ9BZM1 189 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 CHST6Q9GZX3 395 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 ACTL6AO96019 429 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 IGHV4-34P06331 123 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 OR8U8P0C7N1 319 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 OMGP23515 440 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 PPP1CAP62136 330 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 FCN2Q15485 313 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 TAF9Q16594 264 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 OR10D3Q8NH80 312 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 YIPF6Q96EC8 236 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 SLC17A5Q9NRA2 495 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 KIAA1456Q9P272 454 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 TMEM235A6NFC5 223 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 SIRPB1O00241 398 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 HSD17B6O14756 317 aa12.1□□□□□ -0.47
LDB3-202ENST00000361373 MGMTP16455 207 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms