RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SRPK3Q9UPE1 567 aa12.61□□□□□ -0.39
SMC5-201ENST00000361138 ZFAND5O76080 213 aa12.61□□□□□ -0.39
SMC5-201ENST00000361138 SPP1P10451 314 aa12.61□□□□□ -0.39
SMC5-201ENST00000361138 PAX6P26367 422 aa12.61□□□□□ -0.39
SMC5-201ENST00000361138 CD96P40200 585 aa12.61□□□□□ -0.39
SMC5-201ENST00000361138 KCNJ3P48549 501 aa12.61□□□□□ -0.39
SMC5-201ENST00000361138 TMPRSS13Q9BYE2 586 aa12.61□□□□□ -0.39
SMC5-201ENST00000361138 BCO1Q9HAY6 547 aa12.61□□□□□ -0.39
SMC5-201ENST00000361138 TMEM184BQ9Y519 407 aaPredicted RBP12.61□□□□□ -0.39
SMC5-201ENST00000361138 APOBEC1P41238 236 aaKnown RBP12.61□□□□□ -0.39
SMC5-201ENST00000361138 HSD17B7P56937 341 aa12.61□□□□□ -0.39
SMC5-201ENST00000361138 ZG16BQ96DA0 208 aa12.61□□□□□ -0.39
SMC5-201ENST00000361138 LRP12Q9Y561 859 aa12.61□□□□□ -0.39
SMC5-201ENST00000361138 PPM1DO15297 605 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 DRD1P21728 446 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 ARL3P36405 182 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 TMEM268Q5VZI3 342 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 THSD4Q6ZMP0 1018 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 HGDQ93099 445 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 HAO2Q9NYQ3 351 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 TRAPPC2LQ9UL33 140 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 POMT1Q9Y6A1 747 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 G0S2P27469 103 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 SNCAP37840 140 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 CATR1Q13166 79 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 PWWP2BQ6NUJ5 590 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 LCN15Q6UWW0 184 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 OR13D1Q8NGV5 346 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 UBL7Q96S82 380 aaPredicted RBP12.6□□□□□ -0.39
SMC5-201ENST00000361138 GPR84Q9NQS5 396 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 OR51B4Q9Y5P0 310 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 ZNF749O43361 778 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 ICOSLGO75144 302 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 CRYBA1P05813 215 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 FGF7P21781 194 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 EEF1A2Q05639 463 aaKnown RBP12.6□□□□□ -0.39
SMC5-201ENST00000361138 KIAA0895LQ68EN5 471 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 PRSS54Q6PEW0 395 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 OR51B6Q9H340 312 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 BTBD17A6NE02 478 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 ZNF217O75362 1048 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 ARHGEF39Q8N4T4 335 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 PRRX2Q99811 253 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 CDH20Q9HBT6 801 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 ZNF275Q9NSD4 429 aaPredicted RBP12.6□□□□□ -0.39
SMC5-201ENST00000361138 DUS4LO95620 317 aaKnown RBP12.6□□□□□ -0.39
SMC5-201ENST00000361138 UBE2NP61088 152 aaKnown RBP12.6□□□□□ -0.39
SMC5-201ENST00000361138 AGBL4Q5VU57 503 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 TXN2Q99757 166 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 EMC6Q9BV81 110 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 NMES1Q9C002 83 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 ARV1Q9H2C2 271 aa12.6□□□□□ -0.39
SMC5-201ENST00000361138 SCN1AP35498 2009 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 XRCC2O43543 280 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 MBP02144 154 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 TMEM31Q5JXX7 168 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 FAM181AQ8N9Y4 354 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 BAHD1Q8TBE0 780 aaPredicted RBP12.59□□□□□ -0.39
SMC5-201ENST00000361138 NRSN2Q9GZP1 204 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 CCDC187A0A096LP49 1063 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 NSG1A0A0A6YYJ2 146 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 PRAMEF4O60810 478 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 NTN1O95631 604 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 HLA-DQB1P01920 261 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 POU3F2P20265 443 aaPredicted RBP12.59□□□□□ -0.39
SMC5-201ENST00000361138 KITLGP21583 273 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 THEM4Q5T1C6 240 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 C16orf52Q8NHV5 167 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 SLC35B3Q9H1N7 401 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 F6UZH7 168 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 RNF4P78317 190 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 OR2A2Q6IF42 318 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 MSI2Q96DH6 328 aaKnown RBP12.59□□□□□ -0.39
SMC5-201ENST00000361138 TOE1Q96GM8 510 aaKnown RBP12.59□□□□□ -0.39
SMC5-201ENST00000361138 PLEKHF2Q9H8W4 249 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 FGF22Q9HCT0 170 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
SMC5-201ENST00000361138 hCG_1809904A0A1W2PP81 198 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 A0A1W2PR64 198 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 A0A1W2PRV1 198 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 C2orf72A6NCS6 295 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 GLI4P10075 376 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 RAB32Q13637 225 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 TMEM164Q5U3C3 297 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 SDHCQ99643 169 aaPredicted RBP12.59□□□□□ -0.39
SMC5-201ENST00000361138 TPSD1Q9BZJ3 242 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.59□□□□□ -0.39
SMC5-201ENST00000361138 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.59□□□□□ -0.39
SMC5-201ENST00000361138 GSK3AP49840 483 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 RNF151Q2KHN1 245 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 COL13A1Q5TAT6 717 aaPredicted RBP12.59□□□□□ -0.39
SMC5-201ENST00000361138 OR8G2PQ6IF36 304 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 SAT2Q96F10 170 aaPredicted RBP12.59□□□□□ -0.39
SMC5-201ENST00000361138 RNF150Q9ULK6 438 aa12.59□□□□□ -0.39
SMC5-201ENST00000361138 NCR3LG1Q68D85 454 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 IL22RA1Q8N6P7 574 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 OR4F5Q8NH21 305 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 OR4F4Q96R69 305 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 TEX101Q9BY14 249 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 RYDENQ9NUL5 291 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms