RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 C11orf40Q8WZ69 217 aa12.38□□□□□ -0.43
VCP-201ENST00000358901 C12orf49Q9H741 205 aa12.38□□□□□ -0.43
VCP-201ENST00000358901 MEIKINA0A087WXM9 373 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 FAM166BA8MTA8 275 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 TMEM127O75204 238 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 DFFBO76075 338 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 ZGLP1P0C6A0 271 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 CDKN2AP42771 156 aaKnown RBP12.37□□□□□ -0.43
VCP-201ENST00000358901 RNF4P78317 190 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 MZT1Q08AG7 82 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 KCNIP4Q6PIL6 250 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 TFAP2EQ6VUC0 442 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 SFTPA1Q8IWL2 248 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 ZNF784Q8NCA9 323 aaPredicted RBP12.37□□□□□ -0.43
VCP-201ENST00000358901 DUSP18Q8NEJ0 188 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 OR1S2Q8NGQ3 325 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 DLL4Q9NR61 685 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 MTFP1Q9UDX5 166 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 SH3BGRL2Q9UJC5 107 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 V9GYH0 126 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 CCDC88CQ9P219 2028 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 IGHV3-15A0A0B4J1V0 119 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 TRIM77I1YAP6 450 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 GRPP07492 148 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 SLC6A1P30531 599 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 F2RL1P55085 397 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 CBLN3Q6UW01 205 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 Q6ZS52 159 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 APH1AQ96BI3 265 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 COX14Q96I36 57 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 FOXQ1Q9C009 403 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 MIXL1Q9H2W2 232 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 PLEKHF2Q9H8W4 249 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 HEYLQ9NQ87 328 aaPredicted RBP12.37□□□□□ -0.43
VCP-201ENST00000358901 DOCK1Q14185 1865 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 ZNF318Q5VUA4 2279 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 XRCC2O43543 280 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 CXCL13O43927 109 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 WDR1O75083 606 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 CT62P0C5K7 136 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 FAHP16930 419 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 TNFSF4P23510 183 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 CDAP32320 146 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 SLC25A1P53007 311 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 RAG2P55895 527 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 FMODQ06828 376 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 SHBQ15464 509 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 GSG1Q2KHT4 349 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 PRICKLE4Q2TBC4 344 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 LFNGQ8NES3 379 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 MRGPRX4Q96LA9 322 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 OXGR1Q96P68 337 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 LANCL2Q9NS86 450 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 GFOD1Q9NXC2 390 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 TRIP12Q14669 1992 aaPredicted RBP12.37□□□□□ -0.43
VCP-201ENST00000358901 GSTP1P09211 210 aaKnown RBP12.37□□□□□ -0.43
VCP-201ENST00000358901 C9orf50Q5SZB4 431 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 LAIR1Q6GTX8 287 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 BRICD5Q6PL45 260 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 RTN4IP1Q8WWV3 396 aaPredicted RBP12.37□□□□□ -0.43
VCP-201ENST00000358901 ARV1Q9H2C2 271 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 FOXJ3Q9UPW0 622 aa12.37□□□□□ -0.43
VCP-201ENST00000358901 SHISA8B8ZZ34 492 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 DCTN6O00399 190 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 IMPA2O14732 288 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 LRP3O75074 770 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 NRASP01111 189 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 ELLP55199 621 aaPredicted RBP12.36□□□□□ -0.43
VCP-201ENST00000358901 OR2B8PP59922 312 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 TMEM268Q5VZI3 342 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 LRRTM1Q86UE6 522 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 OR10J5Q8NHC4 309 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 MUCL1Q96DR8 90 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 LIN37Q96GY3 246 aaPredicted RBP12.36□□□□□ -0.43
VCP-201ENST00000358901 LRRC61Q9BV99 259 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 LAMB2P55268 1798 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 DOCK5Q9H7D0 1870 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 NPIPB8E9PQR5 432 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 LMO7DNF2Z398 122 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 DEGS1O15121 323 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 DHHO43323 396 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 EDDM3AQ14507 147 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 HAGHQ16775 308 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 OR5AS1Q8N127 324 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 MUC20Q8N307 709 aaPredicted RBP12.36□□□□□ -0.43
VCP-201ENST00000358901 TMEM229BQ8NBD8 167 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 C2orf50Q96LR7 162 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 PATZ1Q9HBE1 687 aaKnown RBP12.36□□□□□ -0.43
VCP-201ENST00000358901 A0A087WZY1 265 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 TRIM64BA6NI03 449 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 UMAD1C9J7I0 102 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 PLA2G10O15496 165 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 CD37P11049 281 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 ABCD3P28288 659 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 CASP6P55212 293 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 FLI1Q01543 452 aaPredicted RBP12.36□□□□□ -0.43
VCP-201ENST00000358901 SSBP1Q04837 148 aaKnown RBP12.36□□□□□ -0.43
VCP-201ENST00000358901 ZNF425Q6IV72 752 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 TIMM10BQ9Y5J6 103 aa12.36□□□□□ -0.43
VCP-201ENST00000358901 ABCA3Q99758 1704 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms