RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CADM4Q8NFZ8 388 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 HMGCLL1Q8TB92 370 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 LTB4R2Q9NPC1 389 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 PPM1DO15297 605 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 TPOP07202 933 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 METTL15P1P0C7V9 234 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 TAF9Q16594 264 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 SKA3Q8IX90 412 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 TMEM217Q8N7C4 229 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 OR1N1Q8NGS0 311 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 OTOSQ8NHW6 89 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 SPSB1Q96BD6 273 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 SHARPINQ9H0F6 387 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF831Q5JPB2 1677 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 ATAD5Q96QE3 1844 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 RRP8O43159 456 aaKnown RBP10.62□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF354AO60765 605 aaPredicted RBP10.62□□□□□ -0.71
COL9A1-202ENST00000357250 GUSBP08236 651 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 WNT3P56703 355 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 DEFA6Q01524 100 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 KCNAB1Q14722 419 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 LTC4SQ16873 150 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 ELFN2Q5R3F8 820 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 RHOUQ7L0Q8 258 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 OR2W3Q7Z3T1 314 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 GALNT16Q8N428 558 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 NINQ8N4C6 2090 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 SFT2D1Q8WV19 159 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 CACNA1IQ9P0X4 2223 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 SIGLEC7Q9Y286 467 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 CEP250Q9BV73 2442 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 ZNFX1Q9P2E3 1918 aaKnown RBP10.62□□□□□ -0.71
COL9A1-202ENST00000357250 SIPA1L1O43166 1804 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 ASPDHA6ND91 283 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 ADRB1P08588 477 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 M6PRP20645 277 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 TGM1P22735 817 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 PRAMEF5Q5TYX0 476 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 PRAMEF6Q5VXH4 476 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 YRDCQ86U90 279 aaKnown RBP10.62□□□□□ -0.71
COL9A1-202ENST00000357250 MFSD4AQ8N468 514 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 CMTM2Q8TAZ6 248 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 EDARADDQ8WWZ3 215 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 SPACA9Q96E40 222 aaPredicted RBP10.62□□□□□ -0.71
COL9A1-202ENST00000357250 SERGEFQ9UGK8 458 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 PURGQ9UJV8 347 aaKnown RBP10.62□□□□□ -0.71
COL9A1-202ENST00000357250 ICMTO60725 284 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 CD160O95971 181 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 OR5H8P0DN80 308 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 EMDP50402 254 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 FUT6P51993 359 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 AARDQ4LEZ3 155 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 TMPRSS7Q7RTY8 843 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 CDH26Q8IXH8 852 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 SLC35E1Q96K37 410 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 SUCNR1Q9BXA5 334 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 GDF2Q9UK05 429 aaPredicted RBP10.62□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF225Q9UK10 706 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 CACNA1EQ15878 2313 aa10.62□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF816-ZNF321PA0A0X1KG74 233 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 SMLR1H3BR10 107 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 TERTO14746 1132 aaKnown RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 PLPP2O43688 288 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 TPPPO94811 219 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 NME1P15531 152 aaKnown RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 RPL12P30050 165 aaKnown RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 RAD52P43351 418 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 LGALS4P56470 323 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 DSCR4P56555 118 aaPredicted RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 CLDN15P56746 228 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 TAS2R45P59539 299 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 FLI1Q01543 452 aaPredicted RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 NRTNQ99748 197 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 NKX6-2Q9C056 277 aaPredicted RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 SLIRPQ9GZT3 109 aaKnown RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 SPNS1Q9H2V7 528 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 EP300Q09472 2414 aaPredicted RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 CASP8AP2Q9UKL3 1982 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 HSD17B6O14756 317 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 GSK3AP49840 483 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 PCBP4P57723 403 aaKnown RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 SSX2Q16385 188 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 ZDHHC23Q8IYP9 409 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 COMMD1Q8N668 190 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 TP53I13Q8NBR0 393 aaPredicted RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 NOXO1Q8NFA2 376 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 ATOH1Q92858 354 aaPredicted RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 ALG14Q96F25 216 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 TIMD4Q96H15 378 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 DOK1Q99704 481 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 UQCC2Q9BRT2 126 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 ENSAO43768 121 aaKnown RBP10.61□□□□□ -0.71
COL9A1-202ENST00000357250 CLN5O75503 358 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 GRPP07492 148 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 EPHA2P29317 976 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 FCGR2CP31995 323 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 NKG7Q16617 165 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 MSRB3Q8IXL7 192 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 ADAM19Q9H013 955 aa10.61□□□□□ -0.71
COL9A1-202ENST00000357250 LANCL2Q9NS86 450 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms