RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 H1FXQ92522 213 aaKnown RBP13.45□□□□□ -0.26
CHD4-201ENST00000357008 LINC00615Q96LM1 132 aaPredicted RBP13.45□□□□□ -0.26
CHD4-201ENST00000357008 IL20Q9NYY1 176 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 SH3BGRL2Q9UJC5 107 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 LRRC30A6NM36 301 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 SHBQ15464 509 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 RNF151Q2KHN1 245 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 ZNF628Q5EBL2 1059 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 NCR3LG1Q68D85 454 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 OR2T2Q6IF00 324 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 MORN4Q8NDC4 146 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 ORAI1Q96D31 301 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 CIB3Q96Q77 187 aaPredicted RBP13.45□□□□□ -0.26
CHD4-201ENST00000357008 AQP7O14520 342 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 NDUFB6O95139 128 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 DEFA4P12838 97 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 CTRB1P17538 263 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 NTF3P20783 257 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 C4orf17Q53FE4 359 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 CTRB2Q6GPI1 263 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 OXGR1Q96P68 337 aa13.45□□□□□ -0.26
CHD4-201ENST00000357008 RBM38Q9H0Z9 239 aaKnown RBP13.45□□□□□ -0.26
CHD4-201ENST00000357008 XRCC2O43543 280 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 EMDP50402 254 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 OR8G1Q15617 311 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 EDAQ92838 391 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 WBP2Q969T9 261 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 ARHGDIGQ99819 225 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 SIRT5Q9NXA8 310 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 ARSGQ96EG1 525 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 IFT22Q9H7X7 185 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 DECR2Q9NUI1 292 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 B9D1Q9UPM9 204 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 RNASEK-C17orf49H0YIS7 233 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 IGHV3-9P01782 118 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 SPP1P10451 314 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 ZNF573Q86YE8 665 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 C12orf49Q9H741 205 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 MEIKINA0A087WXM9 373 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 SERPINE3A8MV23 424 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 CRYBB2P43320 205 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 ANKRD16Q6P6B7 361 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 KIRREL2Q6UWL6 708 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 RDH5Q92781 318 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 MED29Q9NX70 200 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 A0A1W2PNR3 127 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 MAMSTRQ6ZN01 415 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 HGDQ93099 445 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 PSENENQ9NZ42 101 aa13.44□□□□□ -0.26
CHD4-201ENST00000357008 A0A1W2PPH5 198 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 PNLIPRP2P54317 469 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 BTG2P78543 158 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 CLEC9AQ6UXN8 241 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 CDC20BQ86Y33 519 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 OR2A1Q8NGT9 310 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 TOLLIPQ9H0E2 274 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 ANKRD10Q9NXR5 420 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 CHEK1O14757 476 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 ADH4P08319 380 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 CT45A10P0DMU9 189 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 ST6GAL1P15907 406 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 LBX1P52954 281 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 ASB16Q96NS5 453 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 SLC6A13Q9NSD5 602 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 FAM221AA4D161 298 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 IDSB3KWA1 339 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 IGFBP6P24592 240 aaPredicted RBP13.43□□□□□ -0.26
CHD4-201ENST00000357008 CDK5Q00535 292 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 FABP9Q0Z7S8 132 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 OR5AS1Q8N127 324 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 SLC39A7Q92504 469 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 SLC17A5Q9NRA2 495 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 SEC14L6B5MCN3 397 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 RRASP10301 218 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 CALCRP30988 508 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 GUCA2AQ02747 115 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 C11orf40Q8WZ69 217 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 SAT2Q96F10 170 aaPredicted RBP13.43□□□□□ -0.26
CHD4-201ENST00000357008 AKR1E2Q96JD6 320 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 ING1Q9UK53 422 aaPredicted RBP13.43□□□□□ -0.26
CHD4-201ENST00000357008 POM121BA6NF01 834 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 PRRT4C9JH25 899 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 RD3LP0DJH9 198 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 CTDSP1Q9GZU7 261 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 TMPRSS5Q9H3S3 457 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 PLEKHB1Q9UF11 243 aaPredicted RBP13.43□□□□□ -0.26
CHD4-201ENST00000357008 SLC17A4Q9Y2C5 497 aa13.43□□□□□ -0.26
CHD4-201ENST00000357008 A0A0A6YYD5 115 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 IAPPP10997 89 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 RAB5AP20339 215 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 GPR12P47775 334 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 SLC16A12Q6ZSM3 486 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 MICAL3Q7RTP6 2002 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 LSRQ86X29 649 aaPredicted RBP13.42□□□□□ -0.26
CHD4-201ENST00000357008 GINS3Q9BRX5 216 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 A0A1W2PPQ1 181 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 H0Y8X5 98 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 GPR31O00270 319 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 SFTA3P0C7M3 94 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 ATF1P18846 271 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms