RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 SYT7O43581 403 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 FBXO24O75426 580 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 TTRP02766 147 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 GAPDHP04406 335 aaKnown RBP10.16□□□□□ -0.78
CAPN9-202ENST00000354537 FCGR3AP08637 254 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 MUC1P15941 1255 aaPredicted RBP10.16□□□□□ -0.78
CAPN9-202ENST00000354537 GNB3P16520 340 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 PMELP40967 661 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 EMP2P54851 167 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 ZP2Q05996 745 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 ECH1Q13011 328 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 ELAVL1Q15717 326 aaKnown RBP10.16□□□□□ -0.78
CAPN9-202ENST00000354537 SWI5Q1ZZU3 235 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 CLEC18BQ6UXF7 455 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 LHFPL1Q86WI0 220 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 SLC22A18ASQ8N1D0 253 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 COMMD1Q8N668 190 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 ZNF321PQ8N8H1 164 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 POC1AQ8NBT0 407 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 KCNG3Q8TAE7 436 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 KCNK17Q96T54 332 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 LPAR5Q9H1C0 372 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 TUBA4BQ9H853 241 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.16□□□□□ -0.78
CAPN9-202ENST00000354537 PNO1Q9NRX1 252 aaKnown RBP10.16□□□□□ -0.78
CAPN9-202ENST00000354537 SLC22A11Q9NSA0 550 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 CPAMD8Q8IZJ3 1885 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 LMX1BO60663 402 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 DVL1P1P54792 670 aaPredicted RBP10.15□□□□□ -0.78
CAPN9-202ENST00000354537 CLDN6P56747 220 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 MRPS21P82921 87 aaKnown RBP10.15□□□□□ -0.78
CAPN9-202ENST00000354537 EBPQ15125 230 aaKnown RBP10.15□□□□□ -0.78
CAPN9-202ENST00000354537 SLC22A6Q4U2R8 563 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.15□□□□□ -0.78
CAPN9-202ENST00000354537 HLA-DQA1Q5Y7H0 255 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 PARM1Q6UWI2 310 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 TMEM200AQ86VY9 491 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 ANGPTL5Q86XS5 388 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 LYPD6BQ8NI32 183 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 CDCA3Q99618 268 aaPredicted RBP10.15□□□□□ -0.78
CAPN9-202ENST00000354537 TCEAL2Q9H3H9 227 aaPredicted RBP10.15□□□□□ -0.78
CAPN9-202ENST00000354537 FANCFQ9NPI8 374 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 GPR27Q9NS67 375 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 KPTNQ9Y664 436 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 SPTY2D1-AS1A0A0U1RR47 76 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 ZNF217O75362 1048 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 MPZL1O95297 269 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 NUDT14O95848 222 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 CST4P01036 141 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 HIST1H1DP16402 221 aaKnown RBP10.15□□□□□ -0.78
CAPN9-202ENST00000354537 ADH6P28332 368 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 ZNF93P35789 620 aaPredicted RBP10.15□□□□□ -0.78
CAPN9-202ENST00000354537 GNALP38405 381 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 HYAL4Q2M3T9 481 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 OTPQ5XKR4 325 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 ZNF761Q86XN6 746 aaPredicted RBP10.15□□□□□ -0.78
CAPN9-202ENST00000354537 SFTPA2Q8IWL1 248 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 MFSD8Q8NHS3 518 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 TMEM234Q8WY98 164 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 BADQ92934 168 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 CMSS1Q9BQ75 279 aaKnown RBP10.15□□□□□ -0.78
CAPN9-202ENST00000354537 TCEAL7Q9BRU2 100 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 OR8D2Q9GZM6 311 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 PBOV1Q9GZY1 135 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 TMEM184BQ9Y519 407 aaPredicted RBP10.15□□□□□ -0.78
CAPN9-202ENST00000354537 TIMM10BQ9Y5J6 103 aa10.15□□□□□ -0.78
CAPN9-202ENST00000354537 NPIPA5E9PKD4 350 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 MS4A18H0YCH9 400 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 PRKNO60260 465 aaPredicted RBP10.14□□□□□ -0.79
CAPN9-202ENST00000354537 SFTA3P0C7M3 94 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 CTSEP14091 401 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 PTAFRP25105 342 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 ECI1P42126 302 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 CAPZBP47756 277 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 KCNJ3P48549 501 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 BLKP51451 505 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 CCR5P51681 352 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 F2RL1P55085 397 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 FOXK1P85037 733 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 MS4A18Q3C1V0 323 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 FAM76BQ5HYJ3 339 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 POMZP3Q6PJE2 187 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 OR56B1Q8NGI3 324 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 FGF14Q92915 247 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 RAB3CQ96E17 227 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 ADAT3Q96EY9 351 aaPredicted RBP10.14□□□□□ -0.79
CAPN9-202ENST00000354537 MAP3K3Q99759 626 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 OR5AC2Q9NZP5 309 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 KLHL13Q9P2N7 655 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 NPIPA1Q9UND3 350 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 OSGIN2Q9Y236 505 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 MPDZO75970 2070 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 MSGN1A6NI15 193 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 C1orf196B1AJZ1 125 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 SOX1O00570 391 aaPredicted RBP10.14□□□□□ -0.79
CAPN9-202ENST00000354537 CA11O75493 328 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 CELA2BP08218 269 aaPredicted RBP10.14□□□□□ -0.79
CAPN9-202ENST00000354537 SUPT4H1P63272 117 aaKnown RBP10.14□□□□□ -0.79
CAPN9-202ENST00000354537 PLCXD2Q0VAA5 305 aa10.14□□□□□ -0.79
CAPN9-202ENST00000354537 HABP2Q14520 560 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms