RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 COPZ2Q9P299 210 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 ROS1P08922 2347 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 TRBV5-5A0A0J9YX44 114 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 A0A1W2PP11 408 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 CREBL2O60519 120 aaPredicted RBP12.32□□□□□ -0.44
TRIM4-201ENST00000349062 GABREP78334 506 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 RIN1Q13671 783 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 SLC22A6Q4U2R8 563 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 TMPPEQ6ZT21 453 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 BIVMQ86UB2 503 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 BEST3Q8N1M1 668 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 OR51S1Q8NGJ8 323 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 ST7LQ8TDW4 575 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 HAVCR1Q96D42 359 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 ZNF416Q9BWM5 594 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 CCDC163A0A0D9SF12 145 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 A0A0J9YW62 118 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 TRAF3IP2O43734 574 aaPredicted RBP12.32□□□□□ -0.44
TRIM4-201ENST00000349062 DLSTP36957 453 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 C3AR1Q16581 482 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 PHYHD1Q5SRE7 291 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 C6orf15Q6UXA7 325 aaPredicted RBP12.32□□□□□ -0.44
TRIM4-201ENST00000349062 VASH2Q86V25 355 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 CATSPERDQ86XM0 798 aa12.32□□□□□ -0.44
TRIM4-201ENST00000349062 CTAG2O75638 210 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 MC2RQ01718 297 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 SPEM2Q0P670 501 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 AWAT2Q6E213 333 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 NOXO1Q8NFA2 376 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 NUDCD2Q8WVJ2 157 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 PGAM5Q96HS1 289 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 TMEM41AQ96HV5 264 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 ZNF845Q96IR2 970 aaPredicted RBP12.31□□□□□ -0.44
TRIM4-201ENST00000349062 ACTR6Q9GZN1 396 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 ZNF319Q9P2F9 582 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 NXT1Q9UKK6 140 aaKnown RBP12.31□□□□□ -0.44
TRIM4-201ENST00000349062 LHFPL6Q9Y693 200 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 GOSR2O14653 212 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 TLX3O43711 291 aaPredicted RBP12.31□□□□□ -0.44
TRIM4-201ENST00000349062 MPIG6BO95866 241 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 PRSS3P35030 304 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 Q0VFX4 171 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 C4orf46Q504U0 113 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 METTL11BQ5VVY1 283 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 OR52W1Q6IF63 320 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 OR10S1Q8NGN2 331 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 IMMP1LQ96LU5 166 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 MNTQ99583 582 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 PRMT8Q9NR22 394 aaPredicted RBP12.31□□□□□ -0.44
TRIM4-201ENST00000349062 GPR160Q9UJ42 338 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 ACACAQ13085 2346 aa12.31□□□□□ -0.44
TRIM4-201ENST00000349062 UBE2QL1A1L167 161 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 GGT3PA6NGU5 568 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 GABARAPH6UMI1 98 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 IGF2P01344 180 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 ZNF35P13682 527 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 ZFP36L1Q07352 338 aaKnown RBP12.3□□□□□ -0.44
TRIM4-201ENST00000349062 KLF9Q13886 244 aaPredicted RBP12.3□□□□□ -0.44
TRIM4-201ENST00000349062 LIN54Q6MZP7 749 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 TMEM88Q6PEY1 159 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 GVQW1Q8N7I0 195 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 OR2AE1Q8NHA4 323 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 ULBP2Q9BZM5 246 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 CNTD2Q9H8S5 307 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 PCDHB16Q9NRJ7 776 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 TAS2R3Q9NYW6 316 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 ACOT7O00154 380 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 NTN3O00634 580 aaPredicted RBP12.3□□□□□ -0.44
TRIM4-201ENST00000349062 TTRP02766 147 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 NMBP08949 121 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 TDGF1P13385 188 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 MSX1P28360 303 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 CX3CR1P49238 355 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 EXT1Q16394 746 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 ACER2Q5QJU3 275 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 SLC23A3Q6PIS1 610 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 OR4C16Q8NGL9 310 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 MAFIPQ8WZ33 124 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 OR51B6Q9H340 312 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 ZNF208O43345 1280 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 ZNF432O94892 652 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 SP9P0CG40 484 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 B4GALT1P15291 398 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 S100A11P31949 105 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 SORDQ00796 357 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 HLXQ14774 488 aaPredicted RBP12.3□□□□□ -0.44
TRIM4-201ENST00000349062 AKIRIN2Q53H80 203 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 ANGPTL5Q86XS5 388 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 PDZD9Q8IXQ8 264 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 PIGTQ969N2 578 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 MARVELD3Q96A59 401 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 OXGR1Q96P68 337 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 SELENOIQ9C0D9 397 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 STRADBQ9C0K7 418 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 EXO5Q9H790 373 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 GPN1Q9HCN4 374 aaPredicted RBP12.3□□□□□ -0.44
TRIM4-201ENST00000349062 G6PC2Q9NQR9 355 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 IL17BQ9UHF5 180 aa12.3□□□□□ -0.44
TRIM4-201ENST00000349062 LOC100289279A0A1B0GTE1 492 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms