RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 VWA1Q6PCB0 445 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 LRRC28Q86X40 367 aaPredicted RBP19.2■□□□□ 0.66
CACNB1-201ENST00000344140 CPEB3Q8NE35 698 aaKnown RBP19.2■□□□□ 0.66
CACNB1-201ENST00000344140 OR1J2Q8NGS2 313 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 V9GYH0 126 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 FABP12A6NFH5 140 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 TNFSF13O75888 250 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 TMIGD3P0DMS9 266 aaPredicted RBP19.2■□□□□ 0.66
CACNB1-201ENST00000344140 ZNF20P17024 532 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 IGHV1-2P23083 117 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 EVX1P49640 407 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 PLP2Q04941 152 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 GFOD2Q3B7J2 385 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 TBRG1Q3YBR2 411 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 HIKESHIQ53FT3 197 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 METAP1DQ6UB28 335 aaPredicted RBP19.2■□□□□ 0.66
CACNB1-201ENST00000344140 SAMD12Q8N8I0 201 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 SNRNP40Q96DI7 357 aaKnown RBP19.2■□□□□ 0.66
CACNB1-201ENST00000344140 FAM71F1Q96KD3 344 aaPredicted RBP19.2■□□□□ 0.66
CACNB1-201ENST00000344140 ZNF391Q9UJN7 358 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 SPATA2Q9UM82 520 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 PROCRQ9UNN8 238 aa19.2■□□□□ 0.66
CACNB1-201ENST00000344140 PIEZO2Q9H5I5 2752 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 E9PLN8 166 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 PRRG2O14669 202 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 LMX1BO60663 402 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 MTRF1O75570 445 aaKnown RBP19.19■□□□□ 0.66
CACNB1-201ENST00000344140 PAHP00439 452 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 LCATP04180 440 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 ANOS1P23352 680 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 GNALP38405 381 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 HES5Q5TA89 166 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 GLT8D1Q68CQ7 371 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 CNIH2Q6PI25 160 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 Q6ZSR3 168 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 NKAIN3Q8N8D7 197 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 ADAT3Q96EY9 351 aaPredicted RBP19.19■□□□□ 0.66
CACNB1-201ENST00000344140 CMTM3Q96MX0 182 aa19.19■□□□□ 0.66
CACNB1-201ENST00000344140 TP63Q9H3D4 680 aaPredicted RBP19.19■□□□□ 0.66
CACNB1-201ENST00000344140 ERVH48-1M5A8F1 160 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 CALCBP10092 127 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 HOXB1P14653 301 aaPredicted RBP19.18■□□□□ 0.66
CACNB1-201ENST00000344140 SNRPBP14678 240 aaKnown RBP19.18■□□□□ 0.66
CACNB1-201ENST00000344140 PTBP1P26599 531 aaKnown RBP eCLIP19.18■□□□□ 0.66
CACNB1-201ENST00000344140 DDOSTP39656 456 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 GSG1Q2KHT4 349 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 FAM131AQ6UXB0 335 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 GFRALQ6UXV0 394 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 PGAP1Q75T13 922 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 DNAAF1Q8NEP3 725 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 STARD4Q96DR4 205 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 RGCCQ9H4X1 137 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 PLEKHA1Q9HB21 404 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 B3GNT2Q9NY97 397 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 C5orf63A6NC05 138 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 ZNF503-AS2A6NEH8 195 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 FAM25AB3EWG3 89 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 FAM25CB3EWG5 89 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 FAM25GB3EWG6 89 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 DHRS3O75911 302 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 TOXO94900 526 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 SFTPCP11686 197 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 COX5AP20674 150 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 SCAND1P57086 179 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 HGFACQ04756 655 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 SNAI3Q3KNW1 292 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 C1orf162Q8NEQ5 155 aaPredicted RBP19.18■□□□□ 0.66
CACNB1-201ENST00000344140 OR14K1Q8NGZ2 314 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 C10orf35Q96D05 121 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 BOD1Q96IK1 185 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 LYZL4Q96KX0 146 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 CCDC32Q9BV29 185 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 LIN7BQ9HAP6 207 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 CYSLTR2Q9NS75 346 aa19.18■□□□□ 0.66
CACNB1-201ENST00000344140 PKD1L2Q7Z442 2459 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 LOC390937A0A1W2PQ73 354 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 CIB4A0PJX0 185 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 CGAP01215 116 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 APOA1P02647 267 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 CD37P11049 281 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 ELK1P19419 428 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 STOMP27105 288 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 TALDO1P37837 337 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 ZNF529Q6P280 563 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 XKRXQ6PP77 449 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 SGK3Q96BR1 496 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 C1QTNF5Q9BXJ0 243 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 NOX3Q9HBY0 568 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 STEAP1Q9UHE8 339 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 V9GYS6 101 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 RTTNQ86VV8 2226 aa19.17■□□□□ 0.66
CACNB1-201ENST00000344140 A0A0B4J203 849 aa19.16■□□□□ 0.66
CACNB1-201ENST00000344140 DHRS7CA6NNS2 312 aa19.16■□□□□ 0.66
CACNB1-201ENST00000344140 UPK1BO75841 260 aa19.16■□□□□ 0.66
CACNB1-201ENST00000344140 RAB3AP20336 220 aa19.16■□□□□ 0.66
CACNB1-201ENST00000344140 UBE2NP61088 152 aaKnown RBP19.16■□□□□ 0.66
CACNB1-201ENST00000344140 ZNF181Q2M3W8 571 aa19.16■□□□□ 0.66
CACNB1-201ENST00000344140 GABRG1Q8N1C3 465 aa19.16■□□□□ 0.66
CACNB1-201ENST00000344140 OR1M1Q8NGA1 313 aa19.16■□□□□ 0.66
CACNB1-201ENST00000344140 OR5H6Q8NGV6 325 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms