RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 UBE2R2Q712K3 238 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-202ENST00000343599 C5orf24Q7Z6I8 188 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 VTCN1Q7Z7D3 282 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 SDR9C7Q8NEX9 313 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 HAVCR2Q8TDQ0 301 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 NEK7Q8TDX7 302 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 ZNF480Q8WV37 535 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 ZBTB8AQ96BR9 441 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 CMTM7Q96FZ5 175 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 WDYHV1Q96HA8 205 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 NIPSNAP1Q9BPW8 284 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 ACPTQ9BZG2 426 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 FXYD6Q9H0Q3 95 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 SERHLQ9NQF3 203 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 TMEM100Q9NV29 134 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 NUDT4Q9NZJ9 180 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 DNAJB11Q9UBS4 358 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 SPIN1Q9Y657 262 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-202ENST00000343599 ASXL3Q9C0F0 2248 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 PDZD2O15018 2839 aa6.47□□□□□ -1.37
ZNF540-202ENST00000343599 SHISA3A0PJX4 238 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 A4D1N5 150 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 H3BML4 177 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 CREBL2O60519 120 aaPredicted RBP6.46□□□□□ -1.37
ZNF540-202ENST00000343599 HNF1AP20823 631 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 GALP22466 123 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 RPL3P39023 403 aaKnown RBP6.46□□□□□ -1.37
ZNF540-202ENST00000343599 DIO1P49895 249 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 PPP1CAP62136 330 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 LTBQ06643 244 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 EGR3Q06889 387 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 ZNF345Q14585 488 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 EFNB3Q15768 340 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 MESTQ5EB52 335 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 NKAPLQ5M9Q1 402 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 WIPI1Q5MNZ9 446 aaPredicted RBP6.46□□□□□ -1.37
ZNF540-202ENST00000343599 HECTD2Q5U5R9 776 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 GRHL2Q6ISB3 625 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 PAQR6Q6TCH4 344 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 CCNYQ8ND76 341 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 OR4K15Q8NH41 348 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 NRIP2Q9BQI9 281 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 SNHG12Q9BXW3 62 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 PARD6GQ9BYG4 376 aaPredicted RBP6.46□□□□□ -1.37
ZNF540-202ENST00000343599 SLC6A13Q9NSD5 602 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 RLIMQ9NVW2 624 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 ZNF225Q9UK10 706 aa6.46□□□□□ -1.37
ZNF540-202ENST00000343599 ZNF223Q9UK11 482 aaPredicted RBP6.46□□□□□ -1.37
ZNF540-202ENST00000343599 EP300Q09472 2414 aaPredicted RBP6.46□□□□□ -1.37
ZNF540-202ENST00000343599 LRRC3CA6NJW4 275 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 TNFRSF11BO00300 401 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 HS3ST1O14792 307 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 SFTPBP07988 381 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 HKR1P10072 659 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 COX7A2P14406 83 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 ACHEP22303 614 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 GATA3P23771 443 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 WNT4P56705 351 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 SNTB2Q13425 540 aaKnown RBP6.46□□□□□ -1.38
ZNF540-202ENST00000343599 CT83Q5H943 113 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 FAM199XQ6PEV8 388 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-202ENST00000343599 SLC16A14Q7RTX9 510 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 MRPL52Q86TS9 123 aaKnown RBP6.46□□□□□ -1.38
ZNF540-202ENST00000343599 OR4A4PQ8NGN8 299 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 OR5M1Q8NGP8 315 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 OR1J4Q8NGS1 313 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 THEM6Q8WUY1 208 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 NUDT8Q8WV74 236 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 ARL11Q969Q4 196 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 GNRHR2Q96P88 292 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 F2RL3Q96RI0 385 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 JMJD8Q96S16 334 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 DEFB126Q9BYW3 111 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 BEX1Q9HBH7 125 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 GPN1Q9HCN4 374 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-202ENST00000343599 MMP26Q9NRE1 261 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 CHCHD2Q9Y6H1 151 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF462Q96JM2 2506 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 TANC2Q9HCD6 1990 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 A0A0G2JK05 382 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 TMEM129A0AVI4 362 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 DUXAA6NLW8 204 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 OR2AT4A6NND4 320 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 CLDN34H7C241 214 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 CTDSPLO15194 276 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 PMP2P02689 132 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 CLPSP04118 112 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 P04436 131 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 KDELR2P33947 212 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 BMI1P35226 326 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 SERPINF1P36955 418 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 PPOXP50336 477 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 GAS1P54826 345 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 NRG3P56975 720 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 H2BFSP57053 126 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 RNPS1Q15287 305 aaKnown RBP6.46□□□□□ -1.38
ZNF540-202ENST00000343599 HBMQ6B0K9 141 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 MED27Q6P2C8 311 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF551Q7Z340 670 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-202ENST00000343599 TSEN54Q7Z6J9 526 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms