RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 SPATA46Q5T0L3 261 aa18.85■□□□□ 0.61
RBM38-201ENST00000342690 OR52H1Q8NGJ2 320 aa18.85■□□□□ 0.61
RBM38-201ENST00000342690 SLC25A40Q8TBP6 338 aa18.85■□□□□ 0.61
RBM38-201ENST00000342690 MRPL24Q96A35 216 aaKnown RBP18.85■□□□□ 0.61
RBM38-201ENST00000342690 MBD6Q96DN6 1003 aa18.85■□□□□ 0.61
RBM38-201ENST00000342690 ZNF649Q9BS31 505 aa18.85■□□□□ 0.61
RBM38-201ENST00000342690 OR10A2Q9H208 303 aa18.85■□□□□ 0.61
RBM38-201ENST00000342690 PAK1IP1Q9NWT1 392 aaPredicted RBP18.85■□□□□ 0.61
RBM38-201ENST00000342690 FAM206AQ9NX38 181 aa18.85■□□□□ 0.61
RBM38-201ENST00000342690 PTTG3PQ9NZH4 202 aa18.85■□□□□ 0.61
RBM38-201ENST00000342690 FZR1Q9UM11 496 aa18.85■□□□□ 0.61
RBM38-201ENST00000342690 RTTNQ86VV8 2226 aa18.85■□□□□ 0.61
RBM38-201ENST00000342690 POLQO75417 2590 aa18.85■□□□□ 0.61
RBM38-201ENST00000342690 XRCC2O43543 280 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 MT-ND5P03915 603 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 ADRA2AP08913 450 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 C21orf33P30042 268 aaPredicted RBP18.84■□□□□ 0.61
RBM38-201ENST00000342690 MMP16P51512 607 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 SELENOVP59797 346 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 MRPL28Q13084 256 aaKnown RBP18.84■□□□□ 0.61
RBM38-201ENST00000342690 EFNB3Q15768 340 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 SWI5Q1ZZU3 235 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 DEFB113Q30KQ7 82 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 SNAI3Q3KNW1 292 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 OR52N1Q8NH53 320 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 HAVCR2Q8TDQ0 301 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 MRPL37Q9BZE1 423 aaKnown RBP18.84■□□□□ 0.61
RBM38-201ENST00000342690 OR2J1Q9GZK6 312 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 CCDC90BQ9GZT6 254 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 ERVK-18Q9QC07 812 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 ERGIC3Q9Y282 383 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 SNX5Q9Y5X3 404 aa18.84■□□□□ 0.61
RBM38-201ENST00000342690 CSMD2Q7Z408 3487 aa18.83■□□□□ 0.61
RBM38-201ENST00000342690 TMEM129A0AVI4 362 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 OVOL3O00110 214 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 SRSF10O75494 262 aaKnown RBP18.83■□□□□ 0.6
RBM38-201ENST00000342690 GBX2P52951 348 aaPredicted RBP18.83■□□□□ 0.6
RBM38-201ENST00000342690 MFGE8Q08431 387 aaPredicted RBP18.83■□□□□ 0.6
RBM38-201ENST00000342690 TIGD6Q17RP2 521 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 BCL2L15Q5TBC7 163 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 PRSS45Q7RTY3 260 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 PRSS48Q7RTY5 328 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 LRP11Q86VZ4 500 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 SYNPRQ8TBG9 265 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 MARS2Q96GW9 593 aaKnown RBP18.83■□□□□ 0.6
RBM38-201ENST00000342690 SYT3Q9BQG1 590 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 CDCA4Q9BXL8 241 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 PBOV1Q9GZY1 135 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 POFUT1Q9H488 388 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 PLK3Q9H4B4 646 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 CXorf56Q9H5V9 222 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 OPA3Q9H6K4 179 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 ISG20L2Q9H9L3 353 aaKnown RBP18.83■□□□□ 0.6
RBM38-201ENST00000342690 BEX4Q9NWD9 120 aaPredicted RBP18.83■□□□□ 0.6
RBM38-201ENST00000342690 CLEC2DQ9UHP7 191 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 OR52A1Q9UKL2 312 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 SPG11Q96JI7 2443 aa18.83■□□□□ 0.6
RBM38-201ENST00000342690 ANKRD17O75179 2603 aaKnown RBP18.82■□□□□ 0.6
RBM38-201ENST00000342690 B9A039 149 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 HTR1AP08908 422 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 ZNF250P15622 560 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 CDKN1AP38936 164 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 PSMB10P40306 273 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 KLF3P57682 345 aaPredicted RBP18.82■□□□□ 0.6
RBM38-201ENST00000342690 GLYATL3Q5SZD4 288 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 RNLSQ5VYX0 342 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 MBNL2Q5VZF2 373 aaKnown RBP18.82■□□□□ 0.6
RBM38-201ENST00000342690 MRPL21Q7Z2W9 205 aaKnown RBP18.82■□□□□ 0.6
RBM38-201ENST00000342690 OR8B12Q8NGG6 310 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 KLF14Q8TD94 323 aaPredicted RBP18.82■□□□□ 0.6
RBM38-201ENST00000342690 SPRYD4Q8WW59 207 aaPredicted RBP18.82■□□□□ 0.6
RBM38-201ENST00000342690 SGCDQ92629 289 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 RORBQ92753 470 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 PELI1Q96FA3 418 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 SIGLEC11Q96RL6 698 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 MND1Q9BWT6 205 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 CACNG6Q9BXT2 260 aa18.82■□□□□ 0.6
RBM38-201ENST00000342690 MYEF2Q9P2K5 600 aaKnown RBP18.82■□□□□ 0.6
RBM38-201ENST00000342690 NUFIP1Q9UHK0 495 aaKnown RBP18.82■□□□□ 0.6
RBM38-201ENST00000342690 PNPP00491 289 aa18.81■□□□□ 0.6
RBM38-201ENST00000342690 MT-ND2P03891 347 aa18.81■□□□□ 0.6
RBM38-201ENST00000342690 CFL1P23528 166 aaKnown RBP18.81■□□□□ 0.6
RBM38-201ENST00000342690 GFOD2Q3B7J2 385 aa18.81■□□□□ 0.6
RBM38-201ENST00000342690 OR2G6Q5TZ20 316 aa18.81■□□□□ 0.6
RBM38-201ENST00000342690 FBXW12Q6X9E4 464 aa18.81■□□□□ 0.6
RBM38-201ENST00000342690 CATSPERDQ86XM0 798 aa18.81■□□□□ 0.6
RBM38-201ENST00000342690 RGCCQ9H4X1 137 aa18.81■□□□□ 0.6
RBM38-201ENST00000342690 DUSP13Q9UII6 198 aa18.81■□□□□ 0.6
RBM38-201ENST00000342690 ZNF391Q9UJN7 358 aa18.81■□□□□ 0.6
RBM38-201ENST00000342690 MRPS14O60783 128 aaKnown RBP18.8■□□□□ 0.6
RBM38-201ENST00000342690 CLPTM1O96005 669 aa18.8■□□□□ 0.6
RBM38-201ENST00000342690 RAC2P15153 192 aa18.8■□□□□ 0.6
RBM38-201ENST00000342690 MPV17P39210 176 aa18.8■□□□□ 0.6
RBM38-201ENST00000342690 CHN2P52757 468 aa18.8■□□□□ 0.6
RBM38-201ENST00000342690 WNT4P56705 351 aa18.8■□□□□ 0.6
RBM38-201ENST00000342690 SNRPD2P62316 118 aaKnown RBP18.8■□□□□ 0.6
RBM38-201ENST00000342690 PGAP1Q75T13 922 aa18.8■□□□□ 0.6
RBM38-201ENST00000342690 COMMD2Q86X83 199 aa18.8■□□□□ 0.6
RBM38-201ENST00000342690 NANOGP1Q8N7R0 232 aa18.8■□□□□ 0.6
RBM38-201ENST00000342690 OR2AE1Q8NHA4 323 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms