RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SKA3Q8IX90 412 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 OR52N4Q8NGI2 321 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 OR14K1Q8NGZ2 314 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 OR52I2Q8NH67 350 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 OR1F12Q8NHA8 337 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 FGFBP3Q8TAT2 258 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 CHAC2Q8WUX2 184 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 PLEKHA1Q9HB21 404 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 TMEM138Q9NPI0 162 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 KCNMB2Q9Y691 235 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 GABARAPH6UMI1 98 aa17.51■□□□□ 0.39
RTN1-202ENST00000342503 XRCC3O43542 346 aa17.51■□□□□ 0.39
RTN1-202ENST00000342503 YES1P07947 543 aa17.51■□□□□ 0.39
RTN1-202ENST00000342503 PTHLHP12272 177 aa17.51■□□□□ 0.39
RTN1-202ENST00000342503 ARSBP15848 533 aa17.51■□□□□ 0.39
RTN1-202ENST00000342503 GDNFP39905 211 aa17.51■□□□□ 0.39
RTN1-202ENST00000342503 MCEMP1Q8IX19 187 aa17.51■□□□□ 0.39
RTN1-202ENST00000342503 OR4D6Q8NGJ1 314 aa17.51■□□□□ 0.39
RTN1-202ENST00000342503 AKR7LQ8NHP1 331 aa17.51■□□□□ 0.39
RTN1-202ENST00000342503 SORCS2Q96PQ0 1159 aa17.51■□□□□ 0.39
RTN1-202ENST00000342503 TIMM10BQ9Y5J6 103 aa17.51■□□□□ 0.39
RTN1-202ENST00000342503 A0A0U1RQV5 110 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 MEIOCA2RUB1 952 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 EFSO43281 561 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 ORC5O43913 435 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 CEACAM4O75871 244 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 PSG4Q00888 419 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 ECH1Q13011 328 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 RSBN1Q5VWQ0 802 aaPredicted RBP17.5■□□□□ 0.39
RTN1-202ENST00000342503 OR2H1Q9GZK4 316 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 WNT5BQ9H1J7 359 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 CNTD2Q9H8S5 307 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 ARHGAP21Q5T5U3 1957 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 TRAV17A0A0B4J275 112 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 CIB4A0PJX0 185 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 OR6C6A6NF89 314 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 TPPPO94811 219 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 SLC6A1P30531 599 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 BTCP35070 178 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 TPTEP56180 551 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 PCBD1P61457 104 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 ARF1P84077 181 aaKnown RBP17.5■□□□□ 0.39
RTN1-202ENST00000342503 KLF9Q13886 244 aaPredicted RBP17.5■□□□□ 0.39
RTN1-202ENST00000342503 RSPO4Q2I0M5 234 aaPredicted RBP17.5■□□□□ 0.39
RTN1-202ENST00000342503 SFRP5Q5T4F7 317 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 PGAP1Q75T13 922 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 NUFIP2Q7Z417 695 aaKnown RBP17.5■□□□□ 0.39
RTN1-202ENST00000342503 ADGRE4PQ86SQ3 457 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 C15orf40Q8WUR7 153 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 FCAMRQ8WWV6 532 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 ATG5Q9H1Y0 275 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 DIABLOQ9NR28 239 aa17.5■□□□□ 0.39
RTN1-202ENST00000342503 TNRC6AQ8NDV7 1962 aaKnown RBP17.49■□□□□ 0.39
RTN1-202ENST00000342503 GGT3PA6NGU5 568 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 OR6C65A6NJZ3 312 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 ZNF587BE7ETH6 402 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 RPL36A-HNRNPH2H7BZ11 118 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 LDLRAD4O15165 306 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 FARS2O95363 451 aaKnown RBP17.49■□□□□ 0.39
RTN1-202ENST00000342503 ZNF24P17028 368 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 MRPS10P82664 201 aaKnown RBP17.49■□□□□ 0.39
RTN1-202ENST00000342503 STK11Q15831 433 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 SNAI3Q3KNW1 292 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 KRTAP27-1Q3LI81 207 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 NRN1LQ496H8 165 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 DRAM2Q6UX65 266 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 OR5AS1Q8N127 324 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 APH1AQ96BI3 265 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 UPRTQ96BW1 309 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 OR10A2Q9H208 303 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 METTL17Q9H7H0 456 aaPredicted RBP17.49■□□□□ 0.39
RTN1-202ENST00000342503 NPAP1Q9NZP6 1156 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 MYEF2Q9P2K5 600 aaKnown RBP17.49■□□□□ 0.39
RTN1-202ENST00000342503 V9GYS6 101 aa17.49■□□□□ 0.39
RTN1-202ENST00000342503 RIF1Q5UIP0 2472 aaKnown RBP17.48■□□□□ 0.39
RTN1-202ENST00000342503 A0A0B4J293 547 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 CENPXA8MT69 81 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 KDM4BO94953 1096 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 TGM6O95932 706 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 IGHG3P01860 377 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 ERCC1P07992 297 aaPredicted RBP17.48■□□□□ 0.39
RTN1-202ENST00000342503 MMP7P09237 267 aaPredicted RBP17.48■□□□□ 0.39
RTN1-202ENST00000342503 HTR5AP47898 357 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 HGFACQ04756 655 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 PLA1AQ53H76 456 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 C9orf135Q5VTT2 229 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 AKAP14Q86UN6 197 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 UQCC2Q9BRT2 126 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 MRPL15Q9P015 296 aaKnown RBP17.48■□□□□ 0.39
RTN1-202ENST00000342503 UPB1Q9UBR1 384 aa17.48■□□□□ 0.39
RTN1-202ENST00000342503 RBMX2Q9Y388 322 aaKnown RBP17.48■□□□□ 0.39
RTN1-202ENST00000342503 FREM1Q5H8C1 2179 aa17.47■□□□□ 0.39
RTN1-202ENST00000342503 GABRA1P14867 456 aa17.47■□□□□ 0.39
RTN1-202ENST00000342503 FOXG1P55316 489 aaPredicted RBP17.47■□□□□ 0.39
RTN1-202ENST00000342503 OR10K2Q6IF99 312 aa17.47■□□□□ 0.39
RTN1-202ENST00000342503 RNF144BQ7Z419 303 aa17.47■□□□□ 0.39
RTN1-202ENST00000342503 DRAXINQ8NBI3 349 aaPredicted RBP17.47■□□□□ 0.39
RTN1-202ENST00000342503 PHF21AQ96BD5 680 aa17.47■□□□□ 0.39
RTN1-202ENST00000342503 SGK3Q96BR1 496 aa17.47■□□□□ 0.39
RTN1-202ENST00000342503 C7orf50Q9BRJ6 194 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms