RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 SERPINA5P05154 406 aa19.93■□□□□ 0.78
TRIM28-202ENST00000341753 SFTA3P0C7M3 94 aa19.93■□□□□ 0.78
TRIM28-202ENST00000341753 SLC37A1P57057 533 aa19.93■□□□□ 0.78
TRIM28-202ENST00000341753 DMRTC1Q5HYR2 192 aa19.93■□□□□ 0.78
TRIM28-202ENST00000341753 LYPD6Q86Y78 171 aa19.93■□□□□ 0.78
TRIM28-202ENST00000341753 OR13C9Q8NGT0 318 aa19.93■□□□□ 0.78
TRIM28-202ENST00000341753 ADAT3Q96EY9 351 aaPredicted RBP19.93■□□□□ 0.78
TRIM28-202ENST00000341753 HS3ST3A1Q9Y663 406 aa19.93■□□□□ 0.78
TRIM28-202ENST00000341753 SEC16AO15027 2179 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 C9JQL5 133 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 NUDT21O43809 227 aaKnown RBP19.92■□□□□ 0.78
TRIM28-202ENST00000341753 LRP3O75074 770 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 NAT2P11245 290 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 LPAR6P43657 344 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 GLO1Q04760 184 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 PEA15Q15121 130 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 PTPMT1Q8WUK0 201 aaPredicted RBP19.92■□□□□ 0.78
TRIM28-202ENST00000341753 LRRC61Q9BV99 259 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 TXNIPQ9H3M7 391 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 LOC390937A0A1W2PQ73 354 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 SGCBQ16585 318 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 GPR119Q8TDV5 335 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 GSKIPQ9P0R6 139 aa19.92■□□□□ 0.78
TRIM28-202ENST00000341753 IGKV1D-43A0A0B4J1Z2 117 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 NR0B1P51843 470 aaKnown RBP19.91■□□□□ 0.78
TRIM28-202ENST00000341753 HABP2Q14520 560 aaPredicted RBP19.91■□□□□ 0.78
TRIM28-202ENST00000341753 KIAA0895LQ68EN5 471 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 TSLPQ969D9 159 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 TMEM230Q96A57 120 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 VSX1Q9NZR4 365 aaPredicted RBP19.91■□□□□ 0.78
TRIM28-202ENST00000341753 ZNF217O75362 1048 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 MED6O75586 246 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 CD37P11049 281 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 ZNF823P16415 610 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 CD1CP29017 333 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 S100A10P60903 97 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 TGIF1Q15583 401 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 SMAD2Q15796 467 aaKnown RBP19.91■□□□□ 0.78
TRIM28-202ENST00000341753 SMRP1Q8NCR6 262 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 NMES1Q9C002 83 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 LAT2Q9GZY6 243 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 PARP12Q9H0J9 701 aaKnown RBP19.91■□□□□ 0.78
TRIM28-202ENST00000341753 C5orf66Q9H5L9 145 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 PCDHGA1Q9Y5H4 931 aa19.91■□□□□ 0.78
TRIM28-202ENST00000341753 KIR2DS5A0A0G2JLQ3 304 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 A0A0G2JNG1 304 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 COLCA2A8K830 154 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 H0YIG0 161 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 KIR2DS3K7RE56 304 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 MBTPS2O43462 519 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 SGCEO43556 437 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 RAB6AP20340 208 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 CD80P33681 288 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 F2RL1P55085 397 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 KIR2DS5Q14953 304 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 EBPQ15125 230 aaKnown RBP19.9■□□□□ 0.78
TRIM28-202ENST00000341753 RPL7L1Q6DKI1 246 aaKnown RBP19.9■□□□□ 0.78
TRIM28-202ENST00000341753 AWAT2Q6E213 333 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 CLEC18BQ6UXF7 455 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 HOGA1Q86XE5 327 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 ZNF101Q8IZC7 436 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 DMBX1Q8NFW5 382 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 C14orf79Q96F83 325 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 OR10C1Q96KK4 312 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 TRBV6-7A0A0A0MS04 114 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 RNASEK-C17orf49H0YIS7 233 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 ZNF806P0C7X5 589 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 NAAAQ02083 359 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 RAB32Q13637 225 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 FAHD2BQ6P2I3 314 aaPredicted RBP19.9■□□□□ 0.78
TRIM28-202ENST00000341753 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.9■□□□□ 0.78
TRIM28-202ENST00000341753 FAHD2AQ96GK7 314 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 WDR87Q6ZQQ6 2873 aa19.9■□□□□ 0.78
TRIM28-202ENST00000341753 FBXO24O75426 580 aa19.89■□□□□ 0.78
TRIM28-202ENST00000341753 HTR3BO95264 441 aa19.89■□□□□ 0.78
TRIM28-202ENST00000341753 HOXB1P14653 301 aaPredicted RBP19.89■□□□□ 0.78
TRIM28-202ENST00000341753 ANKRD55Q3KP44 614 aa19.89■□□□□ 0.78
TRIM28-202ENST00000341753 IL34Q6ZMJ4 242 aa19.89■□□□□ 0.78
TRIM28-202ENST00000341753 PGAP1Q75T13 922 aa19.89■□□□□ 0.78
TRIM28-202ENST00000341753 ANGPTL5Q86XS5 388 aa19.89■□□□□ 0.78
TRIM28-202ENST00000341753 NKAIN3Q8N8D7 197 aa19.89■□□□□ 0.78
TRIM28-202ENST00000341753 CLCC1Q96S66 551 aa19.89■□□□□ 0.78
TRIM28-202ENST00000341753 METTL8Q9H825 291 aaKnown RBP19.89■□□□□ 0.78
TRIM28-202ENST00000341753 ZMAT5Q9UDW3 170 aaKnown RBP19.89■□□□□ 0.78
TRIM28-202ENST00000341753 PCDH15Q96QU1 1955 aa19.89■□□□□ 0.78
TRIM28-202ENST00000341753 TMED7-TICAM2A0A0A6YYA0 188 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 GP1BBP13224 206 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 CX3CR1P49238 355 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 S100A12P80511 92 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 QRFPP83859 136 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 TMEM104Q8NE00 496 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 BANF2Q9H503 90 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 PDE7BQ9NP56 450 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 A0A1W2PP11 408 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 TO15178 435 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 H2BFMP0C1H6 154 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 MPZP25189 248 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 IL12BP29460 328 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 EMP2P54851 167 aa19.89■□□□□ 0.77
TRIM28-202ENST00000341753 PNLIPRP3Q17RR3 467 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms