RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 FAM234AQ9H0X4 552 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 FTH1P19P0C7X4 201 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 FAHP16930 419 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 BMP5P22003 454 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 DDOSTP39656 456 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 SRP9P49458 86 aaKnown RBP17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 OR10A3P58181 314 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 SORDQ00796 357 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 KCNJ8Q15842 424 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 SFRP5Q5T4F7 317 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 RNLSQ5VYX0 342 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 LSMEM1Q8N8F7 131 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 SLC38A9Q8NBW4 561 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 MIA3Q5JRA6 1907 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 FUT6P51993 359 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 ATG4DQ86TL0 474 aaPredicted RBP17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 OR52I2Q8NH67 350 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 ZC3H10Q96K80 434 aaKnown RBP17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 IGHA2P01877 340 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 SPATA46Q5T0L3 261 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 THSD4Q6ZMP0 1018 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 TMPRSS7Q7RTY8 843 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 C9orf40Q8IXQ3 194 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 NMNAT2Q9BZQ4 307 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 TRAPPC4Q9Y296 219 aa17.55■□□□□ 0.4
SEMA6C-201ENST00000341697 HTR2BP41595 481 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 TAF9Q16594 264 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 CDC42EP2O14613 210 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 PMS2P2O95744 297 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 GABRA1P14867 456 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 CDKN2AP42771 156 aaKnown RBP17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 TGM4P49221 684 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 PHLDA2Q53GA4 152 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 ESCO2Q56NI9 601 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 ELP2Q6IA86 826 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 FAM109AQ8N4B1 249 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 OR51S1Q8NGJ8 323 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 SARGQ9BW04 601 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 PLEKHF2Q9H8W4 249 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 FLRT3Q9NZU0 649 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 ZNF236Q9UL36 1845 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 MSTNO14793 375 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 C20orf85Q9H1P6 137 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 PLK3Q9H4B4 646 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 TMEM235A6NFC5 223 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 CCL3P10147 92 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 DEGS2Q6QHC5 323 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 LYSMD2Q8IV50 215 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 ZNF721Q8TF20 911 aa17.54■□□□□ 0.4
SEMA6C-201ENST00000341697 TRAV1-2A0A0B4J238 106 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 K7EPK0 472 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 ATF1P18846 271 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 ATF4P18848 351 aaPredicted RBP17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 BCL2A1Q16548 175 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 ZAR1Q86SH2 424 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 FAM71E2Q8N5Q1 922 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 HAO2Q9NYQ3 351 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 HSD17B6O14756 317 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 RER1O15258 196 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 ACTL6AO96019 429 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 DYNC2LI1Q8TCX1 351 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 ARL11Q969Q4 196 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 SCARF2Q96GP6 870 aaPredicted RBP17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 FOXJ3Q9UPW0 622 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 UNC13CQ8NB66 2214 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 MEIKINA0A087WXM9 373 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 A0A1W2PR77 199 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 TMEM127O75204 238 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 MED6O75586 246 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 HOXA1P49639 335 aaPredicted RBP17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 LGI3Q8N145 548 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 SEC22AQ96IW7 307 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 SLA2Q9H6Q3 261 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 ZNF391Q9UJN7 358 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 TUBG1P23258 451 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 S100PP25815 95 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 C6orf183Q5T699 404 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 OR6X1Q8NH79 312 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 ZNF486Q96H40 463 aaPredicted RBP17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 GLRX2Q9NS18 164 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 ASF1BQ9NVP2 202 aa17.53■□□□□ 0.4
SEMA6C-201ENST00000341697 MAGEA5P43359 124 aa17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 EIF2S3LQ2VIR3 472 aaKnown RBP17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 SLC23A3Q6PIS1 610 aa17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 OR4D6Q8NGJ1 314 aa17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 SDSLQ96GA7 329 aa17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 KIF25Q9UIL4 384 aa17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 B8ZZF3 427 aa17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 ANKRD34CP0C6C1 535 aa17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 CMTM4Q8IZR5 234 aa17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 ZNF32P17041 273 aa17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 MLF1P58340 268 aa17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 SKP2Q13309 424 aa17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 C8orf82Q6P1X6 216 aaPredicted RBP17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 SF3B5Q9BWJ5 86 aaKnown RBP17.52■□□□□ 0.4
SEMA6C-201ENST00000341697 TMIGD3P0DMS9 266 aaPredicted RBP17.52■□□□□ 0.39
SEMA6C-201ENST00000341697 BLOC1S1P78537 153 aa17.52■□□□□ 0.39
SEMA6C-201ENST00000341697 C17orf47Q8NEP4 570 aa17.52■□□□□ 0.39
SEMA6C-201ENST00000341697 ORAI1Q96D31 301 aa17.52■□□□□ 0.39
SEMA6C-201ENST00000341697 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms