RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 LHFPL6Q9Y693 200 aa13.34□□□□□ -0.27
NECTIN1-202ENST00000340882 CHST1O43916 411 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 SLC16A7O60669 478 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 FBXO24O75426 580 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 PPP1R3DO95685 299 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 PAHP00439 452 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 LHBP01229 141 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 EEF1B2P24534 225 aaKnown RBP13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 EMX1Q04741 257 aaPredicted RBP13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 KRTAP27-1Q3LI81 207 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 CCDC80Q76M96 950 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 FAM122BQ7Z309 247 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 DHDDSQ86SQ9 333 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 NRMQ8IXM6 262 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 SPERTQ8NA61 448 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 BEND2Q8NDZ0 799 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 OR10A6Q8NH74 314 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 SEH1LQ96EE3 360 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 ZNF583Q96ND8 569 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 CGREF1Q99674 301 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 COQ7Q99807 217 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 SYT4Q9H2B2 425 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 RPS6KA6Q9UK32 745 aa13.33□□□□□ -0.28
NECTIN1-202ENST00000340882 TMEM120BA0PK00 339 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 GRPP07492 148 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 ACSM4P0C7M7 580 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 MSX2P35548 267 aaPredicted RBP13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 SLC9A3P48764 834 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 IDH3AP50213 366 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 GUCA2AQ02747 115 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 C11orf91Q3C1V1 193 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 TEX36Q5VZQ5 186 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 OAFQ86UD1 273 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 NDUFA11Q86Y39 141 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 GLB1L2Q8IW92 636 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 FAM216BQ8N7L0 139 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 WFDC9Q8NEX5 89 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 WIPF2Q8TF74 440 aaPredicted RBP13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 CLPTM1LQ96KA5 538 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 ADAT1Q9BUB4 502 aaKnown RBP13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 POLR2J2Q9GZM3 115 aaKnown RBP13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 POLR2J3Q9H1A7 115 aaKnown RBP13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 SERTAD4Q9NUC0 356 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 GRHPRQ9UBQ7 328 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 A4GNTQ9UNA3 340 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 TENM2Q9NT68 2774 aa13.32□□□□□ -0.28
NECTIN1-202ENST00000340882 CDC42EP2O14613 210 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 POLR3GO15318 223 aaPredicted RBP13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 KHDRBS3O75525 346 aaKnown RBP13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 CD14P08571 375 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 VIMP08670 466 aaKnown RBP13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 SELLP14151 372 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 AMY2BP19961 511 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 SLC18A1P54219 525 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 KCNMB1Q16558 191 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 VMACQ2NL98 169 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 WDR38Q5JTN6 314 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 HCP5Q6MZN7 132 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 PGBD2Q6P3X8 592 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 OR4F17Q8NGA8 305 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 SPRYD4Q8WW59 207 aaPredicted RBP13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 RASSF5Q8WWW0 418 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 ZNF570Q96NI8 536 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 OR4F4Q96R69 305 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 HDHD2Q9H0R4 259 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 RANBP3Q9H6Z4 567 aaPredicted RBP13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 ZNF702PQ9H963 129 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 TRIM36Q9NQ86 728 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 RHCGQ9UBD6 479 aa13.31□□□□□ -0.28
NECTIN1-202ENST00000340882 CD300LBA8K4G0 201 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 EFCAB9A8MZ26 197 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 F5H5K5 113 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 DCTN6O00399 190 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 XKRYO14609 159 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 RPL4P36578 427 aaKnown RBP13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 UBE2E1P51965 193 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 PRKCDQ05655 676 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 PCK2Q16822 640 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 CFAP77Q6ZQR2 320 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 PTCHD4Q6ZW05 846 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 PGAP1Q75T13 922 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 C11orf53Q8IXP5 236 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 GJC3Q8NFK1 279 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 TSSK2Q96PF2 358 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 DCTN5Q9BTE1 182 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 NUAK2Q9H093 628 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 VSX1Q9NZR4 365 aaPredicted RBP13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 PRPF19Q9UMS4 504 aaKnown RBP13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 POLR1DQ9Y2S0 133 aa13.3□□□□□ -0.28
NECTIN1-202ENST00000340882 hCG_1807616A0A1W2PRN6 198 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 A6NLC8 198 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 ACOT8O14734 319 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 AHCYL1O43865 530 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 TFF1P04155 84 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 LCATP04180 440 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 CD33P20138 364 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 GPR4P46093 362 aa13.29□□□□□ -0.28
NECTIN1-202ENST00000340882 YAP1P46937 504 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms