RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 BORCS7-ASMTA0A0B4J1R7 106 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 A0A0J9YW62 118 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 FAHP16930 419 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 CD34P28906 385 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 RAB13P51153 203 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 TNK1Q13470 666 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 TIPARPQ7Z3E1 657 aaKnown RBP11.41□□□□□ -0.58
LIN54-201ENST00000340417 MOB3BQ86TA1 216 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 PRRT1Q99946 306 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 PPA2Q9H2U2 334 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 GMEB1Q9Y692 573 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 NCBP2LA6PVI3 153 aaKnown RBP11.41□□□□□ -0.58
LIN54-201ENST00000340417 NOTOA8MTQ0 251 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 H2AFB2P0C5Z0 115 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 CPEP16870 476 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 UBE2NLQ5JXB2 153 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 TMPRSS11FQ6ZWK6 438 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 FBXW5Q969U6 566 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 TSPAN32Q96QS1 320 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 SNX18Q96RF0 628 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 RCE1Q9Y256 329 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 RPL11P62913 178 aaKnown RBP11.4□□□□□ -0.58
LIN54-201ENST00000340417 MRPS10P82664 201 aaKnown RBP11.4□□□□□ -0.58
LIN54-201ENST00000340417 RIMS4Q9H426 269 aaPredicted RBP11.4□□□□□ -0.58
LIN54-201ENST00000340417 CES1P1Q9UKY3 287 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 LAMP3Q9UQV4 416 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 KIR2DS1A0A191URI9 304 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 ACOT8O14734 319 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 KIR2DS4P43632 304 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 RPS25P62851 125 aaKnown RBP11.4□□□□□ -0.58
LIN54-201ENST00000340417 KIR2DS1Q14954 304 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 PCK2Q16822 640 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 ZAR1Q86SH2 424 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 ADGRE4PQ86SQ3 457 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 PLPPR2Q96GM1 343 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 SIGLEC12Q96PQ1 595 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 RNF115Q9Y4L5 304 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 RAB27BO00194 218 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 SULT1C4O75897 302 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 LIPAP38571 399 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 GPR12P47775 334 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 TBCEQ15813 527 aaPredicted RBP11.4□□□□□ -0.58
LIN54-201ENST00000340417 ASB10Q8WXI3 467 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 MOGAT1Q96PD6 335 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 PIMREGQ9BSJ6 248 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 SLC22A13Q9Y226 551 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 PATJQ8NI35 1801 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 SHOXO15266 292 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 HACD4Q5VWC8 232 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 TFAP2EQ6VUC0 442 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 BBS1Q8NFJ9 593 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 LINC01560Q8TB33 94 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 SPACA5Q96QH8 159 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 SLC25A19Q9HC21 320 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 C20orf141Q9NUB4 165 aa11.4□□□□□ -0.58
LIN54-201ENST00000340417 NUDT19A8MXV4 375 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 ASCL1P50553 236 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 RTL8BQ17RB0 113 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 PLA1AQ53H76 456 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 ACTBL2Q562R1 376 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 LPCAT3Q6P1A2 487 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 ATG4DQ86TL0 474 aaPredicted RBP11.39□□□□□ -0.59
LIN54-201ENST00000340417 FAM3DQ96BQ1 224 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 PSORS1C1Q9UIG5 152 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 CACNA1EQ15878 2313 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 COX7A1P24310 79 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 RPS16P62249 146 aaKnown RBP11.39□□□□□ -0.59
LIN54-201ENST00000340417 SNTB1Q13884 538 aaKnown RBP11.39□□□□□ -0.59
LIN54-201ENST00000340417 TSC22D1Q15714 1073 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 PTP4A1Q93096 173 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 ZNF416Q9BWM5 594 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 SHARPINQ9H0F6 387 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 IFNA4P05014 189 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 CD1EP15812 388 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 CD79BP40259 229 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 TNFSF10P50591 281 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 CNPY1Q3B7I2 92 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 Q8IYB0 196 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 OR2AK2Q8NG84 335 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 TCTEX1D2Q8WW35 142 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 CROCCQ5TZA2 2017 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 INMT-MINDY4F8WBC2 141 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 SHC1P29353 583 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 RDH10Q8IZV5 341 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 RNF128Q8TEB7 428 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 DOK1Q99704 481 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 HSD17B6O14756 317 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 AQP8O94778 261 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 RPL19P84098 196 aaKnown RBP11.39□□□□□ -0.59
LIN54-201ENST00000340417 FXNQ16595 210 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 CNIH2Q6PI25 160 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 FAM57AQ8TBR7 257 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 SMAP2Q8WU79 429 aaPredicted RBP11.39□□□□□ -0.59
LIN54-201ENST00000340417 UPRTQ96BW1 309 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 ZNF696Q9H7X3 374 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 ZFP57Q9NU63 452 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 SIGLEC7Q9Y286 467 aa11.39□□□□□ -0.59
LIN54-201ENST00000340417 ASCC3Q8N3C0 2202 aaKnown RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 LOC100289279A0A1B0GTE1 492 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 TSPAN2O60636 221 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms