RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 BBC3Q96PG8 261 aaPredicted RBP13.36□□□□□ -0.27
TUBB4B-201ENST00000340384 SLC6A15Q9H2J7 730 aa13.36□□□□□ -0.27
TUBB4B-201ENST00000340384 ZNF221Q9UK13 617 aa13.36□□□□□ -0.27
TUBB4B-201ENST00000340384 NUBP2Q9Y5Y2 271 aa13.36□□□□□ -0.27
TUBB4B-201ENST00000340384 CFAP46Q8IYW2 2715 aa13.36□□□□□ -0.27
TUBB4B-201ENST00000340384 ZNF716A6NP11 495 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 INMT-MINDY4F8WBC2 141 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 RER1O15258 196 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 CYTIPO60759 359 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 ITGA5P08648 1049 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 SFTPCP11686 197 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 GNALP38405 381 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 GDNFP39905 211 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 SELENOPP49908 381 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 CLDN15P56746 228 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 ZNF121P58317 390 aaPredicted RBP13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 TAS2R20P59543 309 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 KLRB1Q12918 225 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 SLC10A1Q14973 349 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 PGAP1Q75T13 922 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 IZUMO1Q8IYV9 350 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 OR51D1Q8NGF3 324 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 CPT1CQ8TCG5 803 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 UBASH3BQ8TF42 649 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 PTX4Q96A99 478 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 SNRNP40Q96DI7 357 aaKnown RBP13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 PNRC2Q9NPJ4 139 aaKnown RBP13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 A0A0A6YYH2 397 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 LOC390937A0A1W2PQ73 354 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 A6NJ64 397 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 H0YC42 278 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 SYNGR4O95473 234 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 IGHG3P01860 377 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 ARSBP15848 533 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 RAB3AP20336 220 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 DDOSTP39656 456 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 PTH2RP49190 550 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 STARP49675 285 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 PRKXP51817 358 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 HIST1H3AP68431 136 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 SNTB2Q13425 540 aaKnown RBP13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 KLF9Q13886 244 aaPredicted RBP13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 TATDN3Q17R31 274 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 C2orf76Q3KRA6 126 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 PLA1AQ53H76 456 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 C1orf100Q5SVJ3 147 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 RIPPLY2Q5TAB7 128 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 HIST2H3PS2Q5TEC6 136 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 FAM27BQ5VT28 67 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 HIST2H3AQ71DI3 136 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 DOK3Q7L591 496 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 FGD2Q7Z6J4 655 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 ADGRE4PQ86SQ3 457 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 COMMD2Q86X83 199 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 CDH26Q8IXH8 852 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 JAGN1Q8N5M9 183 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 PLPP7Q8NBV4 271 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 SPTSSAQ969W0 71 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 NABP1Q96AH0 204 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 TMEM45BQ96B21 275 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 FGGYQ96C11 551 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 UQCC2Q9BRT2 126 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 ACTR6Q9GZN1 396 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 TMEM138Q9NPI0 162 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 TAS2R8Q9NYW2 309 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 EMC3Q9P0I2 261 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 SPRR3Q9UBC9 169 aa13.35□□□□□ -0.27
TUBB4B-201ENST00000340384 CST2P09228 141 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 CCL1P22362 96 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 FAUP35544 74 aaKnown RBP13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 RAB25P57735 213 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 ECH1Q13011 328 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 ENDOGQ14249 297 aaKnown RBP13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 BCL2A1Q16548 175 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 RNASE12Q5GAN4 147 aaKnown RBP13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 ELFN2Q5R3F8 820 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 PHYHD1Q5SRE7 291 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 GLYATL3Q5SZD4 288 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 ASPHD2Q6ICH7 369 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 PRSS45Q7RTY3 260 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 SLC22A24Q8N4F4 322 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 OR1M1Q8NGA1 313 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 PGAM5Q96HS1 289 aa13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 MOV10Q9HCE1 1003 aaKnown RBP13.34□□□□□ -0.27
TUBB4B-201ENST00000340384 SPTA1P02549 2419 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 ZNF407Q9C0G0 2248 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 GGT3PA6NGU5 568 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 OR6C65A6NJZ3 312 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 ATXN7O15265 892 aaPredicted RBP13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 CTAG2O75638 210 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 SCGNO76038 276 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 RAB6AP20340 208 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 TDGF1P3P51864 188 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 RAG2P55895 527 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 PCBD1P61457 104 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 SSBP1Q04837 148 aaKnown RBP13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 SPOCK1Q08629 439 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 CD300CQ08708 224 aa13.33□□□□□ -0.28
TUBB4B-201ENST00000340384 SCRN3Q0VDG4 424 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms