RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CDRT15Q96T59 188 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 FN3KQ9H479 309 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 FN3KRPQ9HA64 309 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 IL1RAPQ9NPH3 570 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 NDE1Q9NXR1 346 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 DOCK11Q5JSL3 2073 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 POM121CA8CG34 1229 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 M0R135 149 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 GMDSO60547 372 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 RNASE1P07998 156 aaKnown RBP8.91□□□□□ -0.98
CAPN3-202ENST00000337571 CA6P23280 308 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 GATA4P43694 442 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 GSSP48637 474 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 NPY4RP50391 375 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 IL13RA1P78552 427 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 MZT1Q08AG7 82 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 CLEC12AQ5QGZ9 265 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 LCE2AQ5TA79 106 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-202ENST00000337571 C16orf89Q6UX73 402 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 ZDHHC21Q8IVQ6 265 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 PGAM4Q8N0Y7 254 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 BOLLQ8N9W6 283 aaKnown RBP8.91□□□□□ -0.98
CAPN3-202ENST00000337571 UPRTQ96BW1 309 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 ZNF799Q96GE5 643 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 NUDT16L1Q9BRJ7 211 aaKnown RBP8.91□□□□□ -0.98
CAPN3-202ENST00000337571 TRIM36Q9NQ86 728 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 UFSP2Q9NUQ7 469 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 ERVK-18Q9QC07 812 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 RNF7Q9UBF6 113 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 N6AMT1Q9Y5N5 214 aa8.91□□□□□ -0.98
CAPN3-202ENST00000337571 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-202ENST00000337571 A0A1B0GWJ7 208 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 CD300LBA8K4G0 201 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 CLDN34H7C241 214 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 TNFRSF11BO00300 401 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 PHYHO14832 338 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 ARPC2O15144 300 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 NDUFA2O43678 99 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 ENSAO43768 121 aaKnown RBP8.9□□□□□ -0.98
CAPN3-202ENST00000337571 SNX3O60493 162 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 FAM20BO75063 409 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 SEMG1P04279 462 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 CRYBA1P05813 215 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 LIPFP07098 398 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 GRPP07492 148 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 IGHV4-38-2P0DP08 117 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 FMO3P31513 532 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 PYCR1P32322 319 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 PMELP40967 661 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 CD200P41217 278 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 MNAT1P51948 309 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 BPIFB3P59826 476 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 PAX2Q02962 417 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 MAB21L1Q13394 359 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 SLC9A3R2Q15599 337 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 OR8B8Q15620 311 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 KRTAP27-1Q3LI81 207 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 SPATS1Q496A3 300 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 FAM201AQ5SY85 155 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 GPR157Q5UAW9 335 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 DRAM2Q6UX65 266 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 LYPD2Q6UXB3 125 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 ZNF620Q6ZNG0 422 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 SPERTQ8NA61 448 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 PLPP7Q8NBV4 271 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 OR10S1Q8NGN2 331 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 Q8TCH9 128 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 MAP6Q96JE9 813 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 ZNF48Q96MX3 618 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-202ENST00000337571 TECTBQ96PL2 329 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 ADAT1Q9BUB4 502 aaKnown RBP8.9□□□□□ -0.98
CAPN3-202ENST00000337571 MMADHCQ9H3L0 296 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-202ENST00000337571 EGLN3Q9H6Z9 239 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 CENPMQ9NSP4 180 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 C14orf119Q9NWQ9 140 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 MRPL22Q9NWU5 206 aaKnown RBP8.9□□□□□ -0.98
CAPN3-202ENST00000337571 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-202ENST00000337571 CD300AQ9UGN4 299 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 TAGLN3Q9UI15 199 aa8.9□□□□□ -0.98
CAPN3-202ENST00000337571 TRAV38-1A0A0B4J264 116 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 TRAV40A0A0B4J280 105 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 TVP23AA6NH52 213 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 CCNB2O95067 398 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 SPARCP09486 303 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 SLC15A1P46059 708 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 HMGA2P52926 109 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 BLVRAP53004 296 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 DBPQ10586 325 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-202ENST00000337571 MPPED2Q15777 294 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 PRAMEF6Q5VXH4 476 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 WDR25Q64LD2 544 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-202ENST00000337571 SFRP4Q6FHJ7 346 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-202ENST00000337571 PGBD2Q6P3X8 592 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 C16orf87Q6PH81 154 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 C9orf139Q6ZV77 190 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 DCXRQ7Z4W1 244 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 DEFB107AQ8IZN7 70 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 LNX2Q8N448 690 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 FITM2Q8N6M3 262 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 PNLDC1Q8NA58 520 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms