RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 OR10A2Q9H208 303 aa11.96□□□□□ -0.5
COL2A1-201ENST00000337299 CNOT1A5YKK6 2376 aaKnown RBP11.96□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF264O43296 627 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 EIF1BO60739 113 aaKnown RBP11.95□□□□□ -0.5
COL2A1-201ENST00000337299 CLN5O75503 358 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 EIF1P41567 113 aaKnown RBP11.95□□□□□ -0.5
COL2A1-201ENST00000337299 TMEM33P57088 247 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 COTL1Q14019 142 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 TSTD1Q8NFU3 115 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 OR8U1Q8NH10 309 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 HIST1H2BAQ96A08 127 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 PRRX2Q99811 253 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 EMC6Q9BV81 110 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 NUDT9Q9BW91 350 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 PLK3Q9H4B4 646 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 WSB1Q9Y6I7 421 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 OGG1O15527 345 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 C1QL1O75973 258 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 HLA-HP01893 362 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 DBHP09172 617 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 C21orf58P58505 322 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 MFSD9Q8NBP5 474 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 CLEC1AQ8NC01 280 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 ADAD2Q8NCV1 583 aaKnown RBP11.95□□□□□ -0.5
COL2A1-201ENST00000337299 RCBTB1Q8NDN9 531 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 TMEM18Q96B42 140 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 DUSP22Q9NRW4 184 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 KLHL13Q9P2N7 655 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 IGLV3-16A0A075B6K0 115 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 CDRT15L2A8MXV6 281 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 HSPB6O14558 160 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 OR2A4O95047 310 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 HEXAP06865 529 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 NANOS3P60323 173 aaKnown RBP11.95□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF385CQ66K41 422 aaPredicted RBP11.95□□□□□ -0.5
COL2A1-201ENST00000337299 SHISA6Q6ZSJ9 500 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 SPPL3Q8TCT6 385 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 TVP23CQ96ET8 276 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 CCDC74BQ96LY2 380 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 IP6K3Q96PC2 410 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 OR2A7Q96R45 310 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 METTL7AQ9H8H3 244 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 UBQLN4Q9NRR5 601 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 HSF4Q9ULV5 492 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 B9D1Q9UPM9 204 aa11.95□□□□□ -0.5
COL2A1-201ENST00000337299 EP300Q09472 2414 aaPredicted RBP11.95□□□□□ -0.5
COL2A1-201ENST00000337299 CENPVL1A0A0U1RR11 272 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 LINC01387J3KSC0 135 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 KLK3P07288 261 aaPredicted RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 DPP4P27487 766 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 SLC17A1Q14916 467 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 CST6Q15828 149 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 HNRNPA1L2Q32P51 320 aaKnown RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 JMJD6Q6NYC1 403 aaPredicted RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 CHRDL2Q6WN34 429 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 LGI3Q8N145 548 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 EDAQ92838 391 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 BSCL2Q96G97 398 aaPredicted RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 SLC39A9Q9NUM3 307 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 ST6GALNAC2Q9UJ37 374 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 C19orf53Q9UNZ5 99 aaPredicted RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 OR7C1O76099 320 aaPredicted RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 DUS4LO95620 317 aaKnown RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 DDTP30046 118 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 CALCRP30988 508 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 SLC7A9P82251 487 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 PRSS54Q6PEW0 395 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 MOB3CQ70IA8 216 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 MED25Q71SY5 747 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 TGIF2LXQ8IUE1 241 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 IL1F10Q8WWZ1 152 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 RBM24Q9BX46 236 aaKnown RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 SLC17A9Q9BYT1 436 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF275Q9NSD4 429 aaPredicted RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 CEP250Q9BV73 2442 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 RNGTTO60942 597 aaKnown RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 BPNT1O95861 308 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 MPGP29372 298 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 THBS2P35442 1172 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 SLC35A1P78382 337 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 PMS2P11Q13670 270 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 MRPL58Q14197 206 aaKnown RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 ARL6IP1Q15041 203 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 RAB30Q15771 203 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 DBX2Q6ZNG2 339 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 NKAIN3Q8N8D7 197 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 OR51E1Q8TCB6 317 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 SEH1LQ96EE3 360 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 SAT2Q96F10 170 aaPredicted RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 PADI1Q9ULC6 663 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 APC2O95996 2303 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 TRAV34A0A0B4J273 112 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 ARGFXA6NJG6 315 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 ZGLP1P0C6A0 271 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 CDKN2AP42771 156 aaKnown RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 SLC37A1P57057 533 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 PRSS35Q8N3Z0 413 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 FAM160A2Q8N612 972 aaPredicted RBP11.94□□□□□ -0.5
COL2A1-201ENST00000337299 OR51A2Q8NGJ7 313 aa11.94□□□□□ -0.5
COL2A1-201ENST00000337299 OR2A1Q8NGT9 310 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms