RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 PNPP00491 289 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 OR4E1P0C645 316 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 NME2P22392 152 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 CD80P33681 288 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 INPP5JQ15735 1006 aaPredicted RBP12.4□□□□□ -0.42
SF1-202ENST00000334944 SSX2Q16385 188 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 Q499Y3 187 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 C11orf87Q6NUJ2 197 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 SKA3Q8IX90 412 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 SLC43A2Q8N370 569 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 D2HGDHQ8N465 521 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 CCDC54Q8NEL0 328 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 TSEN15Q8WW01 171 aaKnown RBP12.4□□□□□ -0.42
SF1-202ENST00000334944 ZNF501Q96CX3 271 aaPredicted RBP12.4□□□□□ -0.42
SF1-202ENST00000334944 TMEM41AQ96HV5 264 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 LRFN5Q96NI6 719 aa12.4□□□□□ -0.42
SF1-202ENST00000334944 PARP12Q9H0J9 701 aaKnown RBP12.4□□□□□ -0.42
SF1-202ENST00000334944 A0A1B0GTQ1 180 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 NUDT21O43809 227 aaKnown RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 GPRIN2O60269 458 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 TACSTD2P09758 323 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 CCKBRP32239 447 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 EFNB2P52799 333 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 SLC25A1P53007 311 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 INSM1Q01101 510 aaPredicted RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 WDR38Q5JTN6 314 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 NKAPLQ5M9Q1 402 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 FAM24BQ8N5W8 94 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 OR2I1PQ8NGU4 316 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 AKR1E2Q96JD6 320 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 AKIRIN1Q9H9L7 192 aaPredicted RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 SMCO4Q9NRQ5 59 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 OR4C45A6NMZ5 311 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 ALG1L2C9J202 215 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 OR6A2O95222 327 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 PGAM2P15259 253 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 MAPK3P27361 379 aaPredicted RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 AFF3P51826 1226 aaKnown RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 FOXK1P85037 733 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 SCGB2B2Q4G0G5 96 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 ZNF574Q6ZN55 896 aaPredicted RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 KRT77Q7Z794 578 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 LINC00346Q8IVM7 164 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 CADM4Q8NFZ8 388 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 SEC11CQ9BY50 192 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 TREM2Q9NZC2 230 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 RCC2Q9P258 522 aaKnown RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 METTL1Q9UBP6 276 aaKnown RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 TRAV36DV7A0A075B6V5 113 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 TERTO14746 1132 aaKnown RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 ITGA10O75578 1167 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 PMP2P02689 132 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 GLB1P16278 677 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 PGCP20142 388 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 KIR3DL2P43630 455 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 ARRB1P49407 418 aaPredicted RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 ADAM8P78325 824 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 C1orf140Q5VVS0 124 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 GUSBP11Q6P575 273 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 CASTOR1Q8WTX7 329 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 OR6C1Q96RD1 312 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 SSX3Q99909 188 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 UNKLQ9H9P5 680 aaKnown RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 RHOFQ9HBH0 211 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 MED29Q9NX70 200 aa12.39□□□□□ -0.43
SF1-202ENST00000334944 FARSAQ9Y285 508 aaKnown RBP12.39□□□□□ -0.43
SF1-202ENST00000334944 TRAV18A0A075B6X5 111 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 EIF1AYO14602 144 aaKnown RBP12.38□□□□□ -0.43
SF1-202ENST00000334944 RNF4P78317 190 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 MFGE8Q08431 387 aaPredicted RBP12.38□□□□□ -0.43
SF1-202ENST00000334944 ISXQ2M1V0 245 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 DBX2Q6ZNG2 339 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 TMPPEQ6ZT21 453 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 BEND4Q6ZU67 534 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 MAMDC2Q7Z304 686 aaPredicted RBP12.38□□□□□ -0.43
SF1-202ENST00000334944 PLPP7Q8NBV4 271 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 OR51D1Q8NGF3 324 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 UTP23Q9BRU9 249 aaKnown RBP12.38□□□□□ -0.43
SF1-202ENST00000334944 EMC6Q9BV81 110 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 TOLLIPQ9H0E2 274 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 MRPL22Q9NWU5 206 aaKnown RBP12.38□□□□□ -0.43
SF1-202ENST00000334944 SUSD2Q9UGT4 822 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 B9D1Q9UPM9 204 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 AGTR1P30556 359 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 GALNSP34059 522 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 EIF1AXP47813 144 aaKnown RBP12.38□□□□□ -0.43
SF1-202ENST00000334944 NR0B2Q15466 257 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 C10orf91Q5T1B1 145 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 PTCRAQ6ISU1 281 aaPredicted RBP12.38□□□□□ -0.43
SF1-202ENST00000334944 COX15Q7KZN9 410 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 KCTD9Q7L273 389 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 ZNF561Q8N587 486 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 OR5AP2Q8NGF4 316 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 TCEAL7Q9BRU2 100 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 EDEM2Q9BV94 578 aa12.38□□□□□ -0.43
SF1-202ENST00000334944 COA3Q9Y2R0 106 aaPredicted RBP12.38□□□□□ -0.43
SF1-202ENST00000334944 PRSS37A4D1T9 235 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 GGT3PA6NGU5 568 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms