RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 SLC46A1Q96NT5 459 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 SEMA6CQ9H3T2 930 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 IL23AQ9NPF7 189 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 FLRT3Q9NZU0 649 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 FRRS1LQ9P0K9 344 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 SERGEFQ9UGK8 458 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 SUSD2Q9UGT4 822 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 AMDHD2Q9Y303 409 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 LRP12Q9Y561 859 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 FLVCR1Q9Y5Y0 555 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 OR6C6A6NF89 314 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 H3BP45 60 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 ICOSLGO75144 302 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 HOXD4P09016 255 aaPredicted RBP12.67□□□□□ -0.38
EPHB3-201ENST00000330394 ZGLP1P0C6A0 271 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 GLRA1P23415 457 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 DPP4P27487 766 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 TLE4Q04727 773 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 FMODQ06828 376 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 MLF2Q15773 248 aaPredicted RBP12.67□□□□□ -0.38
EPHB3-201ENST00000330394 OR2T2Q6IF00 324 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 CA13Q8N1Q1 262 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 TMEM104Q8NE00 496 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
EPHB3-201ENST00000330394 DOCK1Q14185 1865 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 TAAR5O14804 337 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 ELLP55199 621 aaPredicted RBP12.66□□□□□ -0.38
EPHB3-201ENST00000330394 MLF1P58340 268 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 VWA2Q5GFL6 755 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 PLXDC1Q8IUK5 500 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 LRFN5Q96NI6 719 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 NAA11Q9BSU3 229 aaPredicted RBP12.66□□□□□ -0.38
EPHB3-201ENST00000330394 GCM1Q9NP62 436 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 MMP26Q9NRE1 261 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 ASXL3Q9C0F0 2248 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 A0A1W2PPH5 198 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 ARPC3O15145 178 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 GUSBP08236 651 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 NKX2-1P43699 371 aaPredicted RBP12.66□□□□□ -0.38
EPHB3-201ENST00000330394 NANOS3P60323 173 aaKnown RBP12.66□□□□□ -0.38
EPHB3-201ENST00000330394 TLE1Q04724 770 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 NKAIN2Q5VXU1 208 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 VN1R4Q7Z5H5 301 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 OR51H1Q8NH63 302 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 RAB39BQ96DA2 213 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 ZNF845Q96IR2 970 aaPredicted RBP12.66□□□□□ -0.38
EPHB3-201ENST00000330394 CMTM3Q96MX0 182 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 NKX2-4Q9H2Z4 354 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 PLK3Q9H4B4 646 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 SLC39A9Q9NUM3 307 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 SLC5A6Q9Y289 635 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 TRBV11-1A0A0K0K1C0 115 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 A0A1W2PNR3 127 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 CST7O76096 145 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 MPZL1O95297 269 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 CD1CP29017 333 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 PPP2CBP62714 309 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 PPP2CAP67775 309 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 H1FNTQ75WM6 255 aaPredicted RBP12.66□□□□□ -0.38
EPHB3-201ENST00000330394 LINC00518Q8N0U6 118 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 SGK3Q96BR1 496 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 MMP25Q9NPA2 562 aa12.66□□□□□ -0.38
EPHB3-201ENST00000330394 ZNF587BE7ETH6 402 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 PRAMEF26H0Y7S4 382 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 QDPRP09417 244 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 OR5H8P0DN80 308 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 HOXC12P31275 282 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 MPPED2Q15777 294 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 PCK2Q16822 640 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 RGS7BPQ6MZT1 257 aaPredicted RBP12.65□□□□□ -0.38
EPHB3-201ENST00000330394 WDR88Q6ZMY6 472 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 SFTPA1Q8IWL2 248 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 SEH1LQ96EE3 360 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 PIGLQ9Y2B2 252 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 MED12Q93074 2177 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 PLSCR5A0PG75 271 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 CTDSPLO15194 276 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 GP1BAP07359 652 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 FABP4P15090 132 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 ATRAIDQ6UW56 229 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 RGP1Q92546 391 aaPredicted RBP12.65□□□□□ -0.38
EPHB3-201ENST00000330394 MRGPRX3Q96LB0 322 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 GPR173Q9NS66 373 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 DNAJB12Q9NXW2 375 aaKnown RBP12.65□□□□□ -0.38
EPHB3-201ENST00000330394 R4GMQ9 66 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 HBE1P02100 147 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 G0S2P27469 103 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 H2BFSP57053 126 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 SEMA6DQ8NFY4 1073 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 ZPLD1Q8TCW7 415 aa12.65□□□□□ -0.38
EPHB3-201ENST00000330394 EMG1Q92979 244 aaKnown RBP12.65□□□□□ -0.38
EPHB3-201ENST00000330394 TP53BP1Q12888 1972 aaPredicted RBP12.65□□□□□ -0.39
EPHB3-201ENST00000330394 TIMP1P01033 207 aa12.64□□□□□ -0.39
EPHB3-201ENST00000330394 FOSL1P15407 271 aa12.64□□□□□ -0.39
EPHB3-201ENST00000330394 RFC3P40938 356 aa12.64□□□□□ -0.39
EPHB3-201ENST00000330394 HTR5AP47898 357 aa12.64□□□□□ -0.39
EPHB3-201ENST00000330394 ADPRHP54922 357 aa12.64□□□□□ -0.39
EPHB3-201ENST00000330394 HSF1Q00613 529 aa12.64□□□□□ -0.39
EPHB3-201ENST00000330394 PLGLB1Q02325 96 aa12.64□□□□□ -0.39
EPHB3-201ENST00000330394 C1QL3Q5VWW1 255 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms