RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 ICAM5Q9UMF0 924 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 SNTB1Q13884 538 aaKnown RBP12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 SMIM21Q3B7S5 101 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 PLEKHN1Q494U1 663 aaPredicted RBP12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 RTL6Q6ICC9 239 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 TSEN54Q7Z6J9 526 aaKnown RBP12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 WNT2BQ93097 391 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 ZNF391Q9UJN7 358 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 FXYD6-FXYD2A0A087WZ82 144 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 ZNHIT1O43257 154 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 GSTT2P0CG29 244 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 DUSP1P28562 367 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 ETV1P50549 477 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 ZNF695Q8IW36 515 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 OR2G2Q8NGZ5 317 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 FAM3DQ96BQ1 224 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 CMBLQ96DG6 245 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 FCRL1Q96LA6 429 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 FXYD6Q9H0Q3 95 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 FN3KRPQ9HA64 309 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 KCNMB2Q9Y691 235 aa12.8□□□□□ -0.36
SYNGR1-203ENST00000328933 NDUFB3O43676 98 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 SULT1C4O75897 302 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 IGKV3-11P04433 115 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 P2RY6Q15077 328 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 CLVS2Q5SYC1 327 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 AKAP14Q86UN6 197 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 C22orf15Q8WYQ4 148 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 IMMP1LQ96LU5 166 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 NOX3Q9HBY0 568 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 ARRDC5A6NEK1 342 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 ADAM5Q6NVV9 412 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 C10orf111Q8N326 155 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 SLC39A7Q92504 469 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 GPR35Q9HC97 309 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 MTCL1Q9Y4B5 1905 aaKnown RBP12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 C3orf80F5H4A9 247 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 H3BMH7 237 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 UBBP0CG47 229 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 GPM6AP51674 278 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 CEBPGP53567 150 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 ISL1P61371 349 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 SGPP2Q8IWX5 399 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 MRPL41Q8IXM3 137 aaKnown RBP12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 MS4A5Q9H3V2 200 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 OPA3Q9H6K4 179 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 ZNF552Q9H707 407 aaPredicted RBP12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 SLC7A10Q9NS82 523 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 MGAT4AQ9UM21 535 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 RCE1Q9Y256 329 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 NEUROG3Q9Y4Z2 214 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 LRP12Q9Y561 859 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 ZGRF1Q86YA3 2104 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 MEX3AA1L020 520 aaKnown RBP12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 RECKO95980 971 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 NGFRP08138 427 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 RFPL3SP0C7P2 107 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 SRMP19623 302 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 PPP5CP53041 499 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 LGALS14Q8TCE9 139 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 OR8B4Q96RC9 309 aa12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
SYNGR1-203ENST00000328933 FADS1O60427 444 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 GNG3P63215 75 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 TLE1Q04724 770 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 ZFP69Q49AA0 526 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 FAHD1Q6P587 224 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 NUFIP2Q7Z417 695 aaKnown RBP12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 C17orf82Q86X59 251 aaPredicted RBP12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 OR4D11Q8NGI4 311 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 TREM2Q9NZC2 230 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 SONP18583 2426 aaKnown RBP12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 CATR1Q13166 79 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 CFAP77Q6ZQR2 320 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 SYS1Q8N2H4 156 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 OR51A2Q8NGJ7 313 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 COQ8AQ8NI60 647 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 RGCCQ9H4X1 137 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 LIN7BQ9HAP6 207 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 CADP27708 2225 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 PIGBOS1A0A0B4J2F0 54 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 H7C1Q1 480 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 ANGPTL7O43827 346 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 CELA3AP09093 270 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 HLA-DOBP13765 273 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 PSMA6P60900 246 aaKnown RBP12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 LRRC10Q5BKY1 277 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 AADACL3Q5VUY0 350 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 RAB40AQ8WXH6 277 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 GABARAPL3Q9BY60 117 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 SAP30LQ9HAJ7 183 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 PPP1R3CQ9UQK1 317 aa12.78□□□□□ -0.36
SYNGR1-203ENST00000328933 NOTCH3Q9UM47 2321 aa12.77□□□□□ -0.36
SYNGR1-203ENST00000328933 TMEM129A0AVI4 362 aa12.77□□□□□ -0.36
SYNGR1-203ENST00000328933 OR2AT4A6NND4 320 aa12.77□□□□□ -0.36
SYNGR1-203ENST00000328933 HPGDSO60760 199 aa12.77□□□□□ -0.36
SYNGR1-203ENST00000328933 UPK3AO75631 287 aa12.77□□□□□ -0.36
SYNGR1-203ENST00000328933 F2RL1P55085 397 aa12.77□□□□□ -0.36
SYNGR1-203ENST00000328933 SOWAHCQ53LP3 525 aaPredicted RBP12.77□□□□□ -0.36
SYNGR1-203ENST00000328933 APOOLQ6UXV4 268 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms