RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 NKAIN1Q4KMZ8 207 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 SLC35D2Q76EJ3 337 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 GRASPQ7Z6J2 395 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-201ENST00000328923 TMEM150AQ86TG1 271 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 ZNF101Q8IZC7 436 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 SUMF2Q8NBJ7 301 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 MFSD8Q8NHS3 518 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 TSLPQ969D9 159 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 SEH1LQ96EE3 360 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 PGAM5Q96HS1 289 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 SLC25A21Q9BQT8 299 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-201ENST00000328923 METTL8Q9H825 291 aaKnown RBP10.62□□□□□ -0.71
SHMT2-201ENST00000328923 WSB2Q9NYS7 404 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-201ENST00000328923 SH2B3Q9UQQ2 575 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 TRAV18A0A075B6X5 111 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 UNC119BA6NIH7 251 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 NDUFS8O00217 210 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 TSPAN6O43657 245 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 MTX2O75431 263 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 PAPLNO95428 1278 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 TIMP1P01033 207 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 GIMD1P0DJR0 217 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 CALCBP10092 127 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 NDUFV2P19404 249 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 KLK2P20151 261 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 PRLHRP49683 370 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 FHITP49789 147 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 EFNB2P52799 333 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 LTBQ06643 244 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 TMEM95Q3KNT9 176 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 TMEM108Q6UXF1 575 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 DND1Q8IYX4 353 aaKnown RBP10.62□□□□□ -0.71
SHMT2-201ENST00000328923 KDM8Q8N371 416 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 OR5T1Q8NG75 326 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 ZNF563Q8TA94 476 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 CXorf40AQ8TE69 158 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 PHB2Q99623 299 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 CNTNAP3Q9BZ76 1288 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 LRFN1Q9P244 771 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 INSL5Q9Y5Q6 135 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 OBSL1O75147 1896 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 PLXND1Q9Y4D7 1925 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 TRBV2A0A0J9YWF9 115 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 MED19A0JLT2 244 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-201ENST00000328923 PRRT4C9JH25 899 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 NDUFB8O95169 186 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 C1orf105O95561 183 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 UMODP07911 640 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 TDGF1P13385 188 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 FCARP24071 287 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 LMO1P25800 156 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 BUD31P41223 144 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-201ENST00000328923 CEBPGP53567 150 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 IL13RA1P78552 427 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 DLK1P80370 383 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 TCEAL8Q8IYN2 117 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 PELI1Q96FA3 418 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 C16orf58Q96GQ5 468 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 WFIKKN1Q96NZ8 548 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 RARRES2Q99969 163 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 PLSCR2Q9NRY7 297 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 B4GALT6Q9UBX8 382 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 ARID1AO14497 2285 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 SLC22A31A6NKX4 558 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 OR2AG2A6NM03 316 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 H0YL77 283 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 K7EPK0 472 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 PLPP1O14494 284 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 CD37P11049 281 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 PSMB10P40306 273 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 NAA10P41227 235 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-201ENST00000328923 EIF2B1Q14232 305 aaKnown RBP10.61□□□□□ -0.71
SHMT2-201ENST00000328923 AMZ1Q400G9 498 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 TMEM268Q5VZI3 342 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 FBXO42Q6P3S6 717 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 TMEM64Q6YI46 380 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 MRPL41Q8IXM3 137 aaKnown RBP10.61□□□□□ -0.71
SHMT2-201ENST00000328923 FAM71E2Q8N5Q1 922 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 OR9K2Q8NGE7 335 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 KLK6Q92876 244 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 MOAP1Q96BY2 351 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 ADGRL4Q9HBW9 690 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 PTPRSQ13332 1948 aa10.61□□□□□ -0.71
SHMT2-201ENST00000328923 A0A087WWC5 75 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 FRS3O43559 492 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 ACRP10323 421 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 IL9P15248 144 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 SMAD3P84022 425 aaKnown RBP10.6□□□□□ -0.71
SHMT2-201ENST00000328923 PMS2P11Q13670 270 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 MBOAT2Q6ZWT7 520 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 TMPRSS7Q7RTY8 843 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 GBGT1Q8N5D6 347 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 OR51F2Q8NH61 342 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 CORO2AQ92828 525 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 AQP10Q96PS8 301 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 SLC22A12Q96S37 553 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 GINS3Q9BRX5 216 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 KCNK15Q9H427 330 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 SLC17A5Q9NRA2 495 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 FOXD3Q9UJU5 478 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms