RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 PPA2Q9H2U2 334 aa8.05□□□□□ -1.12
CTC1-201ENST00000315684 B9D1Q9UPM9 204 aa8.05□□□□□ -1.12
CTC1-201ENST00000315684 SLC22A23A1A5C7 686 aa8.05□□□□□ -1.12
CTC1-201ENST00000315684 RNF212BA8MTL3 300 aa8.05□□□□□ -1.12
CTC1-201ENST00000315684 SLC16A6O15403 523 aa8.05□□□□□ -1.12
CTC1-201ENST00000315684 F2RP25116 425 aa8.05□□□□□ -1.12
CTC1-201ENST00000315684 RPL23AP62750 156 aaKnown RBP8.05□□□□□ -1.12
CTC1-201ENST00000315684 SMIM21Q3B7S5 101 aa8.05□□□□□ -1.12
CTC1-201ENST00000315684 KRBOX4Q5JUW0 171 aa8.05□□□□□ -1.12
CTC1-201ENST00000315684 PRSS45Q7RTY3 260 aa8.05□□□□□ -1.12
CTC1-201ENST00000315684 CHDHQ8NE62 594 aaPredicted RBP8.05□□□□□ -1.12
CTC1-201ENST00000315684 HPSE2Q8WWQ2 592 aa8.05□□□□□ -1.12
CTC1-201ENST00000315684 DNAJB12Q9NXW2 375 aaKnown RBP8.05□□□□□ -1.12
CTC1-201ENST00000315684 C9orf172C9J069 976 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 GREM1O60565 184 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 IFNA7P01567 189 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 CSF3P09919 207 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 NPY4RP50391 375 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 CCL8P80075 99 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 OR10K2Q6IF99 312 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 APOOLQ6UXV4 268 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 CARFQ8N187 725 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 OR2AK2Q8NG84 335 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 MMP28Q9H239 520 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 NRIP3Q9NQ35 241 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 COL4A6Q14031 1691 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 SRMP19623 302 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 SLC37A1P57057 533 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 EMX1Q04741 257 aaPredicted RBP8.04□□□□□ -1.12
CTC1-201ENST00000315684 ZNF816Q0VGE8 651 aaPredicted RBP8.04□□□□□ -1.12
CTC1-201ENST00000315684 CLVS2Q5SYC1 327 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 ZNF620Q6ZNG0 422 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 CLDN23Q96B33 292 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 VWCEQ96DN2 955 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 C1QTNF3Q9BXJ4 246 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 DOCK8Q8NF50 2099 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 ACP1P24666 158 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 DNASE1P24855 282 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 BAXQ07812 192 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 AKR1C8PQ5T2L2 129 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 PRAMEF5Q5TYX0 476 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 PRAMEF6Q5VXH4 476 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 OR1M1Q8NGA1 313 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 ARL11Q969Q4 196 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 ISL2Q96A47 359 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 RPEQ96AT9 228 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 FAM3DQ96BQ1 224 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 IGKV3-7A0A075B6H7 116 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 SLC22A5O76082 557 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 NKX2-2O95096 273 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 CPT2P23786 658 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 ETV1P50549 477 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 PDLIM3Q53GG5 364 aaPredicted RBP8.04□□□□□ -1.12
CTC1-201ENST00000315684 ZAR1Q86SH2 424 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 OR8B3Q8NGG8 313 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 MOGAT1Q96PD6 335 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 OR8B2Q96RD0 313 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 RHNO1Q9BSD3 238 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 THAP7Q9BT49 309 aaPredicted RBP8.04□□□□□ -1.12
CTC1-201ENST00000315684 WDR54Q9H977 334 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 NEU3Q9UQ49 428 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 MSMO1Q15800 293 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 SLC35D3Q5M8T2 416 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 OR8G2PQ6IF36 304 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 TMEM65Q6PI78 240 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 H2BFWTQ7Z2G1 175 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 ZFAND1Q8TCF1 268 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 MMP27Q9H306 513 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 ZCCHC4Q9H5U6 513 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 COPS3Q9UNS2 423 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 ZNF236Q9UL36 1845 aa8.04□□□□□ -1.12
CTC1-201ENST00000315684 A0A1W2PR77 199 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 H3BMQ9 156 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 SDCBPO00560 298 aaPredicted RBP8.03□□□□□ -1.12
CTC1-201ENST00000315684 ALPLP05186 524 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 ZNF728P0DKX0 622 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 RRAS2P62070 204 aaPredicted RBP8.03□□□□□ -1.12
CTC1-201ENST00000315684 STUMQ69YW2 141 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 ZNF679Q8IYX0 411 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 ZNF251Q9BRH9 671 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 ISG20L2Q9H9L3 353 aaKnown RBP8.03□□□□□ -1.12
CTC1-201ENST00000315684 SPTBP11277 2137 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 ZNF705EA8MWA4 302 aaPredicted RBP8.03□□□□□ -1.12
CTC1-201ENST00000315684 FGF5P12034 268 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 CD1EP15812 388 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 CAMLGP49069 296 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 GABARAPL2P60520 117 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 MAB21L1Q13394 359 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 AQP6Q13520 282 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 RTL8BQ17RB0 113 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 KRTCAP3Q53RY4 240 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 OR13G1Q8NGZ3 307 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 SIGLEC11Q96RL6 698 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 BCO1Q9HAY6 547 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 ASF1BQ9NVP2 202 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 CISD1Q9NZ45 108 aaKnown RBP8.03□□□□□ -1.12
CTC1-201ENST00000315684 OR5V1Q9UGF6 321 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 GABRA4P48169 554 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 TAS2R46P59540 309 aa8.03□□□□□ -1.12
CTC1-201ENST00000315684 UBE3DQ7Z6J8 389 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms