RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PATE4P0C8F1 98 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 GAAP10253 952 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 HLA-DOBP13765 273 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 RPS4Y1P22090 263 aaKnown RBP12.2□□□□□ -0.46
DDX54-202ENST00000314045 PTGS2P35354 604 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 CD79BP40259 229 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 CCR6P51684 374 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 CRYBA2P53672 197 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 INSM1Q01101 510 aaPredicted RBP12.2□□□□□ -0.46
DDX54-202ENST00000314045 ZNF85Q03923 595 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 ENY2Q9NPA8 101 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 ANAPC1Q9H1A4 1944 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 FABP6P51161 128 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 SNRPD2P62316 118 aaKnown RBP12.2□□□□□ -0.46
DDX54-202ENST00000314045 CSRP2Q16527 193 aa12.2□□□□□ -0.46
DDX54-202ENST00000314045 MEX3BQ6ZN04 569 aaKnown RBP12.2□□□□□ -0.46
DDX54-202ENST00000314045 LIN37Q96GY3 246 aaPredicted RBP12.2□□□□□ -0.46
DDX54-202ENST00000314045 VRK1Q99986 396 aaPredicted RBP12.2□□□□□ -0.46
DDX54-202ENST00000314045 AQP7P3A6NL99 342 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 NKX2-8O15522 239 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 GDF9O60383 454 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 RP2O75695 350 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 HLA-AP01891 365 aaKnown RBP12.19□□□□□ -0.46
DDX54-202ENST00000314045 HLA-HP01893 362 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 EIF4EP06730 217 aaKnown RBP12.19□□□□□ -0.46
DDX54-202ENST00000314045 SRP9P49458 86 aaKnown RBP12.19□□□□□ -0.46
DDX54-202ENST00000314045 PCOLCEQ15113 449 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 DRAM2Q6UX65 266 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 Q6ZNX1 250 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 ITPKCQ96DU7 683 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 RAB9BQ9NP90 201 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 MRM2Q9UI43 246 aaKnown RBP12.19□□□□□ -0.46
DDX54-202ENST00000314045 MGAT4AQ9UM21 535 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 IGHA1P01876 353 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 SP1P08047 785 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 RAB35Q15286 201 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 C3AR1Q16581 482 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 C6orf183Q5T699 404 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 FAM109AQ8N4B1 249 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 GIMAP1Q8WWP7 306 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 SLC7A6Q92536 515 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 SF3B5Q9BWJ5 86 aaKnown RBP12.19□□□□□ -0.46
DDX54-202ENST00000314045 OR2B2Q9GZK3 357 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 ADAM19Q9H013 955 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 UFSP2Q9NUQ7 469 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 PTTG3PQ9NZH4 202 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 MAB21L2Q9Y586 359 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 F5H5P2 479 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 SLC17A2O00624 439 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 GALP22466 123 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 AGFG1P52594 562 aaKnown RBP12.19□□□□□ -0.46
DDX54-202ENST00000314045 ZNF774Q6NX45 483 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 COMTD1Q86VU5 262 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 ZNF695Q8IW36 515 aa12.19□□□□□ -0.46
DDX54-202ENST00000314045 IGKV3D-11A0A0A0MRZ8 115 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 A0A0J9YW62 118 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 ATF1P18846 271 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 OR8G1Q15617 311 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 TAF9Q16594 264 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 ZFAND1Q8TCF1 268 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 DOK1Q99704 481 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 RTL8AQ9BWD3 113 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 ALG5Q9Y673 324 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 SELENOPP49908 381 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 PP6455Q8WZ26 134 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 FGF11Q92914 225 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 APOBEC3DQ96AK3 386 aaPredicted RBP12.18□□□□□ -0.46
DDX54-202ENST00000314045 HINT2Q9BX68 163 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 ANGPTL4Q9BY76 406 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 AKIP1Q9NQ31 210 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 ARPC5O15511 151 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 ASAH2BP0C7U1 165 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 COX6A1P12074 109 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 CEBPGP53567 150 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 GSG1Q2KHT4 349 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 PABPC1L2AQ5JQF8 200 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 LCN10Q6JVE6 187 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 APCDD1LQ8NCL9 501 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 OR51A2Q8NGJ7 313 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 EMG1Q92979 244 aaKnown RBP12.18□□□□□ -0.46
DDX54-202ENST00000314045 PMS2P2O95744 297 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 ZNF133P52736 654 aaPredicted RBP12.18□□□□□ -0.46
DDX54-202ENST00000314045 RPS23P62266 143 aaKnown RBP12.18□□□□□ -0.46
DDX54-202ENST00000314045 CFHR1Q03591 330 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 WFDC8Q8IUA0 241 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 ZNF285Q96NJ3 590 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 DPCDQ9BVM2 203 aaPredicted RBP12.18□□□□□ -0.46
DDX54-202ENST00000314045 PCDHB10Q9UN67 800 aa12.18□□□□□ -0.46
DDX54-202ENST00000314045 ACTL6AO96019 429 aa12.17□□□□□ -0.46
DDX54-202ENST00000314045 LPLP06858 475 aa12.17□□□□□ -0.46
DDX54-202ENST00000314045 SLC9A3R2Q15599 337 aa12.17□□□□□ -0.46
DDX54-202ENST00000314045 ZNF528Q3MIS6 628 aa12.17□□□□□ -0.46
DDX54-202ENST00000314045 DMKNQ6E0U4 476 aaPredicted RBP12.17□□□□□ -0.46
DDX54-202ENST00000314045 SLC25A26Q70HW3 274 aa12.17□□□□□ -0.46
DDX54-202ENST00000314045 ABHD3Q8WU67 409 aa12.17□□□□□ -0.46
DDX54-202ENST00000314045 ELMOD3Q96FG2 381 aa12.17□□□□□ -0.46
DDX54-202ENST00000314045 SPIN2AQ99865 258 aa12.17□□□□□ -0.46
DDX54-202ENST00000314045 SPIN2BQ9BPZ2 258 aa12.17□□□□□ -0.46
DDX54-202ENST00000314045 BORCS7-ASMTA0A0B4J1R7 106 aa12.17□□□□□ -0.46
DDX54-202ENST00000314045 DXOO77932 396 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms