RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 TRA2BP62995 288 aaKnown RBP11.14□□□□□ -0.63
EBF1-201ENST00000313708 TMEM268Q5VZI3 342 aa11.14□□□□□ -0.63
EBF1-201ENST00000313708 SLC35A4Q96G79 324 aa11.14□□□□□ -0.63
EBF1-201ENST00000313708 SPIN2AQ99865 258 aa11.14□□□□□ -0.63
EBF1-201ENST00000313708 SPIN2BQ9BPZ2 258 aa11.14□□□□□ -0.63
EBF1-201ENST00000313708 EMC9Q9Y3B6 208 aa11.14□□□□□ -0.63
EBF1-201ENST00000313708 EREGO14944 169 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 GALR1P47211 349 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 ACOT6Q3I5F7 207 aaPredicted RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 Q6ZN92 141 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 LGI3Q8N145 548 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 CCDC74AQ96AQ1 378 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 MRPL38Q96DV4 380 aaKnown RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 MARS2Q96GW9 593 aaKnown RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 NICN1Q9BSH3 213 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 PARD6GQ9BYG4 376 aaPredicted RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 CPEB1Q9BZB8 566 aaKnown RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 PLEKHJ1Q9NW61 149 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 A0A0U1RQF3 1178 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 ZNF840PA6NDX5 716 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 SLC16A7O60669 478 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 TMEM225BP0DP42 221 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 CTSAP10619 480 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 GABRR1P24046 479 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 EXOSC7Q15024 291 aaKnown RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 RCBTB1Q8NDN9 531 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 OR51A4Q8NGJ6 313 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 OR5D14Q8NGL3 314 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 SDSLQ96GA7 329 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 CIB3Q96Q77 187 aaPredicted RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 NUDT9Q9BW91 350 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 TMEM59Q9BXS4 323 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 ZNF552Q9H707 407 aaPredicted RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 SERINC1Q9NRX5 453 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 FUT9Q9Y231 359 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 SLC45A1Q9Y2W3 748 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 TRBV5-4A0A0C4DH59 114 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 SCDO00767 359 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 LAG3P18627 525 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 PHLDA2Q53GA4 152 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 FAM58AQ8N1B3 248 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 SIGLECL1Q8N7X8 197 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 C19orf47Q8N9M1 422 aaKnown RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 CCDC71LQ8N9Z2 235 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 EID2BQ96D98 161 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 OR52A1Q9UKL2 312 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 H0YL77 283 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 P2RY10O00398 339 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 NUDT21O43809 227 aaKnown RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 HLA-HP01893 362 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 OPN1MWP04001 364 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 OPN1MW2P0DN77 364 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 OPN1MW3P0DN78 364 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 RAB7AP51149 207 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 B4GALNT1Q00973 533 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 ZNF845Q96IR2 970 aaPredicted RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 FAM71F1Q96KD3 344 aaPredicted RBP11.13□□□□□ -0.63
EBF1-201ENST00000313708 BANF2Q9H503 90 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 TUBA4BQ9H853 241 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 CHRNA9Q9UGM1 479 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 NAGKQ9UJ70 344 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 SIGLEC7Q9Y286 467 aa11.13□□□□□ -0.63
EBF1-201ENST00000313708 TBX6O95947 436 aaPredicted RBP11.12□□□□□ -0.63
EBF1-201ENST00000313708 ZNF16P17020 682 aaPredicted RBP11.12□□□□□ -0.63
EBF1-201ENST00000313708 PPICP45877 212 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 PRLHRP49683 370 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 RPS23P62266 143 aaKnown RBP11.12□□□□□ -0.63
EBF1-201ENST00000313708 OR5R1Q8NH85 324 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 BORCS7Q96B45 105 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 FGGYQ96C11 551 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 WFIKKN1Q96NZ8 548 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 TAAR9Q96RI9 348 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 RRAGCQ9HB90 399 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 DHRS7CA6NNS2 312 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 G3V3Q6 166 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 FGF16O43320 207 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 Q5PR19 223 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 CDRT4Q8N9R6 151 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 TSLPQ969D9 159 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 RNF122Q9H9V4 155 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 CHST11Q9NPF2 352 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 LYRM2Q9NU23 88 aaPredicted RBP11.12□□□□□ -0.63
EBF1-201ENST00000313708 ZNF586Q9NXT0 402 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 OR1A2Q9Y585 309 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 TRAPPC1Q9Y5R8 145 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 TTC3P53804 2025 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 LSM6P62312 80 aaKnown RBP11.12□□□□□ -0.63
EBF1-201ENST00000313708 RPS15P62841 145 aaKnown RBP11.12□□□□□ -0.63
EBF1-201ENST00000313708 REEP5Q00765 189 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 ZNF92Q03936 586 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 ZP2Q05996 745 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 CLEC18BQ6UXF7 455 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 SLC22A18Q96BI1 424 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 GALNT14Q96FL9 552 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 RAB11FIP5Q9BXF6 653 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 PRODH2Q9UF12 536 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 OSGIN2Q9Y236 505 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 TRAV8-7A0A075B6U6 113 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HSBP1L1C9JCN9 74 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HIST1H2BKO60814 126 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms