RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ACSM4P0C7M7 580 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 IL2RGP31785 369 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 Q6ZRG5 221 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 C3orf58Q8NDZ4 430 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 MR1Q95460 341 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 CMBLQ96DG6 245 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 EGLN1Q9GZT9 426 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 CFAP20Q9Y6A4 193 aaKnown RBP8.01□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF816-ZNF321PA0A0X1KG74 233 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 ANKUB1A6NFN9 424 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 CTSVO60911 334 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 TBC1D28Q2M2D7 210 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 LIPNQ5VXI9 398 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SLC16A14Q7RTX9 510 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 RAB24Q969Q5 203 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 CABLES2Q9BTV7 478 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 NTMQ9P121 344 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 POU2F3Q9UKI9 436 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 PLAGL1Q9UM63 463 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 PIAS3Q9Y6X2 628 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 CUL9Q8IWT3 2517 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 TERTO14746 1132 aaKnown RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 OGG1O15527 345 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SSTR4P31391 388 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 ERVFC1P60507 584 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 GALNT10Q86SR1 603 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 CYB561A3Q8NBI2 242 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SENP5Q96HI0 755 aaPredicted RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 DERL3Q96Q80 235 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 OR8B4Q96RC9 309 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 FZD3Q9NPG1 666 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 TBX21Q9UL17 535 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 MRPL42Q9Y6G3 142 aaKnown RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 LOC107986453A0A1B0GWG9 222 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 KLRC4-KLRK1H3BQV0 150 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 K7ERQ8 282 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SNRPBP14678 240 aaKnown RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 OR2B8PP59922 312 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 COTL1Q14019 142 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 MRM1Q6IN84 353 aaKnown RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 RBM23Q86U06 439 aaKnown RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 OR51F2Q8NH61 342 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 MITD1Q8WV92 249 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 GPR137Q96N19 417 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SLC46A2Q9BY10 475 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 CSAG2Q9Y5P2 127 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 MPDU1O75352 247 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SBK3P0C264 359 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 CD27P26842 260 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 KIAA0040Q15053 153 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SLC7A5P1Q8MH63 180 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 ZMAT5Q9UDW3 170 aaKnown RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 DSPPQ9NZW4 1301 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 MFNGO00587 321 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 COX20Q5RI15 118 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 OR52I2Q8NH67 350 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 FAM213BQ8TBF2 198 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 GPX7Q96SL4 187 aaPredicted RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 BCAS3Q9H6U6 928 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF226Q9NYT6 803 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 GJD2Q9UKL4 321 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 CREBBPQ92793 2442 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 GPR31O00270 319 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 MRPL33O75394 65 aaKnown RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 CHRM4P08173 479 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 INHBBP09529 407 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 POU3F2P20265 443 aaPredicted RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 COMPP49747 757 aaPredicted RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 SIM1P81133 766 aaPredicted RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 KTI12Q96EK9 354 aaPredicted RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 BOD1Q96IK1 185 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SOX7Q9BT81 388 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 OR51I2Q9H344 312 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 PARP11Q9NR21 331 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 A4GNTQ9UNA3 340 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF814B7Z6K7 855 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 M0R143 59 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SHC1P29353 583 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 RAB7AP51149 207 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SEC13P55735 322 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SERF2P84101 59 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 OR7A5Q15622 319 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 CD200R1LQ6Q8B3 271 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 SELENOIQ9C0D9 397 aa8□□□□□ -1.13
COL6A5-202ENST00000312481 DNMT3BQ9UBC3 853 aaKnown RBP8□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF239Q16600 458 aaKnown RBP7.99□□□□□ -1.13
COL6A5-202ENST00000312481 SYT9Q86SS6 491 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF683Q8IZ20 524 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 DEDDO75618 318 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 FUT4P22083 530 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 VAX1Q5SQQ9 334 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 OR7E24Q6IFN5 339 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 TBPL2Q6SJ96 375 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 OR2G3Q8NGZ4 309 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 PPP1R1CQ8WVI7 109 aa7.99□□□□□ -1.13
COL6A5-202ENST00000312481 APOBEC3DQ96AK3 386 aaPredicted RBP7.99□□□□□ -1.13
COL6A5-202ENST00000312481 FYTTD1Q96QD9 318 aaKnown RBP7.99□□□□□ -1.13
COL6A5-202ENST00000312481 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.99□□□□□ -1.13
COL6A5-202ENST00000312481 YARS2Q9Y2Z4 477 aaKnown RBP7.99□□□□□ -1.13
COL6A5-202ENST00000312481 PRSS21Q9Y6M0 314 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms