RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 HSPE1-MOB4S4R3N1 261 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 M0R1X1 148 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 CT62P0C5K7 136 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 WNT3P56703 355 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 TMEM268Q5VZI3 342 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 FAM122CQ6P4D5 195 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 BHLHA15Q7RTS1 189 aaPredicted RBP7.02□□□□□ -1.29
SCN9A-201ENST00000303354 TGIF2LXQ8IUE1 241 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 SLC30A7Q8NEW0 376 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 OR2AK2Q8NG84 335 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 SYT11Q9BT88 431 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 TMEM231Q9H6L2 316 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 FBXO7Q9Y3I1 522 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 TRAV39A0A0B4J263 110 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 LOC100289279A0A1B0GTE1 492 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 DNPH1O43598 174 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 TAS2R30P59541 319 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 SHBQ15464 509 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 TUSC5Q8IXB3 177 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 C11orf42Q8N5U0 333 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 CNRIP1Q96F85 164 aaPredicted RBP7.02□□□□□ -1.29
SCN9A-201ENST00000303354 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.02□□□□□ -1.29
SCN9A-201ENST00000303354 A0A1W2PPE3 182 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 DHRS4L1P0CG22 281 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 ARL6IP1Q15041 203 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 TM4SF19Q96DZ7 209 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 ST3GAL6Q9Y274 331 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 IGHV5-10-1A0A0J9YXX1 117 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 GALR2O43603 387 aaPredicted RBP7.02□□□□□ -1.29
SCN9A-201ENST00000303354 NAGAP17050 411 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 CDC20BQ86Y33 519 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 PRSS37A4D1T9 235 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 B3GALNT1O75752 331 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 CD3EP07766 207 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 GPR3P46089 330 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 UBE2G1P62253 170 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 CYCSP99999 105 aaKnown RBP7.02□□□□□ -1.29
SCN9A-201ENST00000303354 HAGHQ16775 308 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 ADAM5Q6NVV9 412 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 TXLNGYQ9BZA5 131 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 PCDHGA9Q9Y5G4 932 aaKnown RBP7.02□□□□□ -1.29
SCN9A-201ENST00000303354 CORINQ9Y5Q5 1042 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 TUBGCP6Q96RT7 1819 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 FRG2CA6NGY1 282 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 RER1O15258 196 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 DHHO43323 396 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 FCGR2CP31995 323 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 TMEM267Q0VDI3 215 aaPredicted RBP7.02□□□□□ -1.29
SCN9A-201ENST00000303354 FUNDC1Q8IVP5 155 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 OPALINQ96PE5 141 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 IKZF5Q9H5V7 419 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 SLC25A22Q9H936 323 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 BOLA1Q9Y3E2 137 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 FCGR3BO75015 233 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 SP6Q3SY56 376 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 HIKESHIQ53FT3 197 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 LRRC29Q8WV35 223 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 SPACA9Q96E40 222 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-201ENST00000303354 AKR1E2Q96JD6 320 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 OPN3Q9H1Y3 402 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-201ENST00000303354 MYH3P11055 1940 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 A0A1B0GVG6 124 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 HRKO00198 91 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 OLFM2O95897 454 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 GLULP15104 373 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 ERHP84090 104 aaKnown RBP7.01□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF117Q03924 483 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 C17orf78Q8N4C9 275 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 NOXO1Q8NFA2 376 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 DPH3Q96FX2 82 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 KIRREL1Q96J84 757 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 CMTM3Q96MX0 182 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 AHDC1Q5TGY3 1603 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-201ENST00000303354 TRBV23-1A0A0A0MS06 115 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 PNLIPP16233 465 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 TBPP20226 339 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 CEACAM6P40199 344 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 REG1BP48304 166 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 NXPH1P58417 271 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 RPS4XP62701 263 aaKnown RBP7.01□□□□□ -1.29
SCN9A-201ENST00000303354 TGIF2LYQ8IUE0 185 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 SFT2D1Q8WV19 159 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 COMMD5Q9GZQ3 224 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 PHIPQ8WWQ0 1821 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 IGKV3D-15A0A087WSY6 115 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 TRABD2BA6NFA1 517 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 IGKV3-15P01624 115 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 NME1P15531 152 aaKnown RBP7.01□□□□□ -1.29
SCN9A-201ENST00000303354 ZMAT1Q5H9K5 638 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF573Q86YE8 665 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 CELF2-AS1Q8N7Q2 184 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 C19orf12Q9NSK7 152 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 POLDIP2Q9Y2S7 368 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 NUP98P52948 1817 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 F5H697 171 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 CSN1S1P47710 185 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 SUB1P53999 127 aaKnown RBP eCLIP7.01□□□□□ -1.29
SCN9A-201ENST00000303354 LY6EQ16553 131 aa7.01□□□□□ -1.29
SCN9A-201ENST00000303354 PELI3Q8N2H9 469 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms