RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 VWCEQ96DN2 955 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 HIST1H2BLQ99880 126 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 TMEM106CQ9BVX2 250 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 SLC17A9Q9BYT1 436 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 MARCH5Q9NX47 278 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 PPIAL4AQ9Y536 164 aa12.91□□□□□ -0.34
CDT1-201ENST00000301019 MTCL1Q9Y4B5 1905 aaKnown RBP12.91□□□□□ -0.34
CDT1-201ENST00000301019 A0A1W2PRU2 124 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 OR4C45A6NMZ5 311 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 TMEM189-UBE2V1I3L0A0 370 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 HOXA2O43364 376 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 OR4A8P0C604 315 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 NID1P14543 1247 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 RPL12P30050 165 aaKnown RBP12.9□□□□□ -0.34
CDT1-201ENST00000301019 LPCAT3Q6P1A2 487 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 OR4D6Q8NGJ1 314 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 ZNF417Q8TAU3 575 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 TAAR9Q96RI9 348 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 A8MWP6 167 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 SCGNO76038 276 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 TACSTD2P09758 323 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 SNCAP37840 140 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 CTXN1P60606 82 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 NTHL1P78549 312 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 IAH1Q2TAA2 248 aaPredicted RBP12.9□□□□□ -0.34
CDT1-201ENST00000301019 SP6Q3SY56 376 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 KIRREL2Q6UWL6 708 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 ZFP62Q8NB50 900 aaPredicted RBP12.9□□□□□ -0.34
CDT1-201ENST00000301019 TMEM229BQ8NBD8 167 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 SFXN5Q8TD22 340 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 GNRHR2Q96P88 292 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 NICN1Q9BSH3 213 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 PRODH2Q9UF12 536 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 PADI1Q9ULC6 663 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 INSL5Q9Y5Q6 135 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 C1QTNF3-AMACRE9PGA6 284 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 H3BQ15 152 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 TCF21O43680 179 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 NSA2O95478 260 aaKnown RBP12.9□□□□□ -0.34
CDT1-201ENST00000301019 THBS1P07996 1170 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 KIR3DL2P43630 455 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 ASPHD2Q6ICH7 369 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 CNKSR3Q6P9H4 555 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 TMPRSS11FQ6ZWK6 438 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 STT3BQ8TCJ2 826 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 MENTQ9BUN1 341 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 LMAN2LQ9H0V9 348 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 BANF2Q9H503 90 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 DHDHQ9UQ10 334 aa12.9□□□□□ -0.34
CDT1-201ENST00000301019 COL6A3P12111 3177 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 FAM221AA4D161 298 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 MARCH11A6NNE9 402 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 DBIP07108 87 aaKnown RBP12.89□□□□□ -0.35
CDT1-201ENST00000301019 IGFALSP35858 605 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 MLF1P58340 268 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 DLK1P80370 383 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 SLC48A1Q6P1K1 146 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 TMEM184AQ6ZMB5 413 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 TIFAQ96CG3 184 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 PRRT1Q99946 306 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 ZNF426Q9BUY5 554 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 OR11A1Q9GZK7 315 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 SRMSQ9H3Y6 488 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 UBQLN4Q9NRR5 601 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 A0A1W2PP11 408 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 ALOX5APP20292 161 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 DNASE1L1P49184 302 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 SLC26A5P58743 744 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 RHEBQ15382 184 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 RNF151Q2KHN1 245 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 PLXDC2Q6UX71 529 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 OR4K15Q8NH41 348 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 MS4A6EQ96DS6 147 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 WDR34Q96EX3 536 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 TMEM208Q9BTX3 173 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 APOBEC3BQ9UH17 382 aaKnown RBP12.89□□□□□ -0.35
CDT1-201ENST00000301019 TP53TG5Q9Y2B4 290 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 YIPF1Q9Y548 306 aa12.89□□□□□ -0.35
CDT1-201ENST00000301019 LOC101059948A0A1B0GTJ6 334 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 WIPF3A6NGB9 483 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 CSTBP04080 98 aaKnown RBP12.88□□□□□ -0.35
CDT1-201ENST00000301019 SULT1A2P50226 295 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 INSM1Q01101 510 aaPredicted RBP12.88□□□□□ -0.35
CDT1-201ENST00000301019 MFGE8Q08431 387 aaPredicted RBP12.88□□□□□ -0.35
CDT1-201ENST00000301019 ELOBQ15370 118 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 HIST2H3PS2Q5TEC6 136 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 EIF5AL1Q6IS14 154 aaKnown RBP12.88□□□□□ -0.35
CDT1-201ENST00000301019 SLC8B1Q6J4K2 584 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 CPEB2Q7Z5Q1 589 aaKnown RBP12.88□□□□□ -0.35
CDT1-201ENST00000301019 ZNF101Q8IZC7 436 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 LSM7Q9UK45 103 aaKnown RBP12.88□□□□□ -0.35
CDT1-201ENST00000301019 LIPGQ9Y5X9 500 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 EYSQ5T1H1 3165 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 C17orf51A8MQB3 221 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 DUS4LO95620 317 aaKnown RBP12.88□□□□□ -0.35
CDT1-201ENST00000301019 TIMP1P01033 207 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 CSF2RAP15509 400 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 BTG2P78543 158 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 TMEM123Q8N131 208 aa12.88□□□□□ -0.35
CDT1-201ENST00000301019 CARFQ8N187 725 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms