RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 FOXJ2Q9P0K8 574 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 KCNG2Q9UJ96 466 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 SMCHD1A6NHR9 2005 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 THSD7AQ9UPZ6 1657 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 ZFP92A6NM28 416 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 ACHEP22303 614 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 NPY4RP50391 375 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 MRPS34P82930 218 aaKnown RBP6.4□□□□□ -1.39
RAG1-201ENST00000299440 MFGE8Q08431 387 aaPredicted RBP6.4□□□□□ -1.39
RAG1-201ENST00000299440 SMN1Q16637 294 aaKnown RBP6.4□□□□□ -1.39
RAG1-201ENST00000299440 VMA21Q3ZAQ7 101 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 LIPNQ5VXI9 398 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 Q6ZRG5 221 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 MOGAT3Q86VF5 341 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 LGALS14Q8TCE9 139 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 SMAP2Q8WU79 429 aaPredicted RBP6.4□□□□□ -1.39
RAG1-201ENST00000299440 GUCD1Q96NT3 240 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 NIPSNAP1Q9BPW8 284 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 DDA1Q9BW61 102 aa6.4□□□□□ -1.39
RAG1-201ENST00000299440 UNKLQ9H9P5 680 aaKnown RBP6.4□□□□□ -1.39
RAG1-201ENST00000299440 SPAG17Q6Q759 2223 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 TRAV38-1A0A0B4J264 116 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 MGST1P10620 155 aaKnown RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 THBS3P49746 956 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 GABARAPL2P60520 117 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 UBE2G2P60604 165 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 FAM74A1Q5RGS3 127 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 NKAIN3Q8N8D7 197 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 ABHD3Q8WU67 409 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 MAFIPQ8WZ33 124 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 DVL3Q92997 716 aaPredicted RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 RABL2AQ9UBK7 228 aaPredicted RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 CLN8Q9UBY8 286 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 RABL2BQ9UNT1 228 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 STRCP1A6NGW2 1772 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 F5H5P2 479 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 MAGEB4O15481 346 aaPredicted RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 SOD1P00441 154 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 WNT1P04628 370 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 UBBP0CG47 229 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 HTN1P15515 57 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 PCK2Q16822 640 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 HIKESHIQ53FT3 197 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 ACTBL2Q562R1 376 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 KRBOX4Q5JUW0 171 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 UBE2NLQ5JXB2 153 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 ADGRE4PQ86SQ3 457 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 FAM3DQ96BQ1 224 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 ZCCHC4Q9H5U6 513 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 PRDM7Q9NQW5 492 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 CISD1Q9NZ45 108 aaKnown RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 M0QYG6 137 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 CDK1P06493 297 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 NAGAP17050 411 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 HTR1FP30939 366 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 SNRPGP62308 76 aaKnown RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 FMODQ06828 376 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 TBRG1Q3YBR2 411 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 TEX37Q96LM6 180 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 UHRF2Q96PU4 802 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 RASL11BQ9BPW5 248 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 MOB1AQ9H8S9 216 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 SLC39A9Q9NUM3 307 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 TAS2R16Q9NYV7 291 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 AMMECR1Q9Y4X0 333 aaPredicted RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 SHANK3Q9BYB0 1731 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 SCAF4O95104 1147 aaKnown RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 SHC1P29353 583 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 SERPINF1P36955 418 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 ACVR1Q04771 509 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 ZNF816Q0VGE8 651 aaPredicted RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 CLINT1Q14677 625 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 GLCCI1Q86VQ1 547 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 LRRC56Q8IYG6 542 aaPredicted RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 AMER3Q8N944 861 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 OR2T6Q8NHC8 308 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 ALG14Q96F25 216 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 ABHD17AQ96GS6 310 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 COA4Q9NYJ1 87 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 A4GNTQ9UNA3 340 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 ST3GAL6Q9Y274 331 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 CDK5RAP2Q96SN8 1893 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 CDK2AP1O14519 115 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 DTYMKP23919 212 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 OR10A3P58181 314 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 MCCD1P59942 119 aaPredicted RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 RPS25P62851 125 aaKnown RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 EMC4Q5J8M3 183 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 ZNF547Q8IVP9 402 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 ISL2Q96A47 359 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 GALMQ96C23 342 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 AP1S3Q96PC3 154 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 THAP7Q9BT49 309 aaPredicted RBP6.39□□□□□ -1.39
RAG1-201ENST00000299440 RCE1Q9Y256 329 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 CACNG2Q9Y698 323 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 USP54Q70EL1 1684 aa6.39□□□□□ -1.39
RAG1-201ENST00000299440 IGHV3-43A0A0B4J1X8 118 aa6.38□□□□□ -1.39
RAG1-201ENST00000299440 FITM1A5D6W6 292 aa6.38□□□□□ -1.39
RAG1-201ENST00000299440 M0R1X1 148 aa6.38□□□□□ -1.39
RAG1-201ENST00000299440 SEMG1P04279 462 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms