RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 IL3RAP26951 378 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 PLP1P60201 277 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 NHLH1Q02575 133 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 NHLH2Q02577 135 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 CTF1Q16619 201 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 FAM209AQ5JX71 171 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 CCDC190Q86UF4 302 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 CXorf58Q96LI9 332 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 MSL2Q9HCI7 577 aa13.52□□□□□ -0.25
SCN3B-201ENST00000299333 TCN2P20062 427 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 GUCA2AQ02747 115 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 DHRS7BQ6IAN0 325 aaPredicted RBP13.51□□□□□ -0.25
SCN3B-201ENST00000299333 PLEKHB1Q9UF11 243 aaPredicted RBP13.51□□□□□ -0.25
SCN3B-201ENST00000299333 ZNF142P52746 1687 aaPredicted RBP13.51□□□□□ -0.25
SCN3B-201ENST00000299333 NID1P14543 1247 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 ASCL1P50553 236 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 HLXQ14774 488 aaPredicted RBP13.51□□□□□ -0.25
SCN3B-201ENST00000299333 CLLU1OSQ5K130 101 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 DHRS4L2Q6PKH6 230 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 TMEM207Q6UWW9 146 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 OR5AS1Q8N127 324 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 ASB13Q8WXK3 278 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 HGDQ93099 445 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 SMIM19Q96E16 107 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 OR2D2Q9H210 308 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 TAAR2Q9P1P5 351 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 ABCD4O14678 606 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 ADH4P08319 380 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 OR5H8P0DN80 308 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 SDHBP21912 280 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 TAZQ16635 292 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 PRSS36Q5K4E3 855 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 DERL3Q96Q80 235 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 LMAN1LQ9HAT1 526 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 NAT8BQ9UHF3 227 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 CST7O76096 145 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 H1FNTQ75WM6 255 aaPredicted RBP13.51□□□□□ -0.25
SCN3B-201ENST00000299333 SMIM4Q8WVI0 70 aa13.51□□□□□ -0.25
SCN3B-201ENST00000299333 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.51□□□□□ -0.25
SCN3B-201ENST00000299333 HMGN4O00479 90 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 SEMG1P04279 462 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 EDN1P05305 212 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 RPS27P42677 84 aaKnown RBP13.5□□□□□ -0.25
SCN3B-201ENST00000299333 GNG10P50151 68 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 CCSMST1Q4G0I0 132 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 CDC20BQ86Y33 519 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 FAM131CQ96AQ9 280 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 SLAMF6Q96DU3 332 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 ADGRL4Q9HBW9 690 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 ASIC5Q9NY37 505 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 OBP2AQ9NY56 170 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 SLC25A37Q9NYZ2 338 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 UBE2L5PA0A1B0GUS4 154 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 CST5P28325 142 aaPredicted RBP13.5□□□□□ -0.25
SCN3B-201ENST00000299333 AFMIDQ63HM1 303 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 FCRL6Q6DN72 434 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 C19orf43Q9BQ61 176 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 GYPAP02724 150 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 MMP15P51511 669 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 DUSP5Q16690 384 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 RIMKLAQ8IXN7 391 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 RTN4IP1Q8WWV3 396 aaPredicted RBP13.5□□□□□ -0.25
SCN3B-201ENST00000299333 CHRDL1Q9BU40 450 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 TMEM9BQ9NQ34 198 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 NKX6-3A6NJ46 265 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 SOX15O60248 233 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 NOVP48745 357 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 PJVKQ0ZLH3 352 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 CDK5R1Q15078 307 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 MPPED2Q15777 294 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 FAM27D1Q5T7N8 215 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 AGBL4Q5VU57 503 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 RDH5Q92781 318 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 HMX2A2RU54 273 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 FAM166BA8MTA8 275 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 CLDN34H7C241 214 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 MT-ATP6P00846 226 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 BCL6P41182 706 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 TUSC1Q2TAM9 212 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 COL5A1-AS1Q5SY13 56 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 FAM210BQ96KR6 192 aa13.5□□□□□ -0.25
SCN3B-201ENST00000299333 PACRGQ96M98 296 aaPredicted RBP13.5□□□□□ -0.25
SCN3B-201ENST00000299333 MYADML2A6NDP7 307 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 SIRPB1O00241 398 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 SLC35E2P0CK97 266 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 EN2P19622 333 aaPredicted RBP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 KCNJ3P48549 501 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 CD300CQ08708 224 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 HTR3DQ70Z44 454 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 LINC00052Q96N35 136 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 LANCL2Q9NS86 450 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 OR6C3Q9NZP0 311 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 SLC17A4Q9Y2C5 497 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 IGHV3-64DA0A0J9YX35 117 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 A0A1W2PPH5 198 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 EIF1BO60739 113 aaKnown RBP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 EPHA2P29317 976 aa13.49□□□□□ -0.25
SCN3B-201ENST00000299333 PXNP49023 591 aaPredicted RBP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 ZCCHC14Q8WYQ9 949 aaKnown RBP13.49□□□□□ -0.25
SCN3B-201ENST00000299333 OR2A14Q96R47 310 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms