RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 OR3A1P47881 315 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 RPL24P83731 157 aaKnown RBP11.31□□□□□ -0.6
SLX4-201ENST00000294008 SLC45A3Q96JT2 553 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 RSG1Q9BU20 258 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 ACPTQ9BZG2 426 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 ASH2LQ9UBL3 628 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 ARID1BQ8NFD5 2236 aaPredicted RBP11.31□□□□□ -0.6
SLX4-201ENST00000294008 TNFRSF1AP19438 455 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 BCDIN3DQ7Z5W3 292 aaKnown RBP11.31□□□□□ -0.6
SLX4-201ENST00000294008 TDHQ8IZJ6 230 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 FLYWCH2Q96CP2 140 aaKnown RBP11.31□□□□□ -0.6
SLX4-201ENST00000294008 CABLES2Q9BTV7 478 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 TUBA4BQ9H853 241 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 SLC7A10Q9NS82 523 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 HERVK_113P61574 105 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 YPEL5P62699 121 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 TMUB1Q9BVT8 246 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 SNX11Q9Y5W9 270 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 CLEC18AA5D8T8 446 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 HTR4Q13639 388 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 COL9A3Q14050 684 aaPredicted RBP11.31□□□□□ -0.6
SLX4-201ENST00000294008 ZNF766Q5HY98 468 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 MFSD4AQ8N468 514 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 CLEC18CQ8NCF0 446 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 SEH1LQ96EE3 360 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 SMIM7Q9BQ49 75 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 ADAT1Q9BUB4 502 aaKnown RBP11.31□□□□□ -0.6
SLX4-201ENST00000294008 VWDEQ8N2E2 1590 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 C6orf106Q9H6K1 298 aaPredicted RBP11.31□□□□□ -0.6
SLX4-201ENST00000294008 TAAR3PQ9P1P4 343 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 TMEM218A2RU14 115 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 FAM24AA6NFZ4 105 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 CBR3O75828 277 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 GUK1Q16774 197 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 TIFABQ6ZNK6 161 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 RTN4RQ9BZR6 473 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 PIGMQ9H3S5 423 aa11.31□□□□□ -0.6
SLX4-201ENST00000294008 H0Y8X5 98 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 HTN3P15516 51 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 CCR7P32248 378 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 CAMPP49913 170 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 PARM1Q6UWI2 310 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 DMRTA2Q96SC8 542 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 SEC22CQ9BRL7 303 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 PGPEP1Q9NXJ5 209 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 MOKQ9UQ07 419 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 M0R082 166 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 GASTP01350 101 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 CDCA2Q69YH5 1023 aaPredicted RBP11.3□□□□□ -0.6
SLX4-201ENST00000294008 ZNF620Q6ZNG0 422 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 ABI3BPQ7Z7G0 1075 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 EIF4E3Q8N5X7 224 aaKnown RBP11.3□□□□□ -0.6
SLX4-201ENST00000294008 AKR7LQ8NHP1 331 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 RAB37Q96AX2 223 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 SIGLEC10Q96LC7 697 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 TMPRSS11DO60235 418 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 FCGR3BO75015 233 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 ERVFC1P60507 584 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 PPP1CAP62136 330 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 COL19A1Q14993 1142 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 PCK2Q16822 640 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 HES3Q5TGS1 186 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 PRSS35Q8N3Z0 413 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 TMED6Q8WW62 240 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 CSF3RQ99062 836 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 MARCH5Q9NX47 278 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 ZNF346Q9UL40 294 aaKnown RBP11.3□□□□□ -0.6
SLX4-201ENST00000294008 TOX3O15405 576 aaPredicted RBP11.3□□□□□ -0.6
SLX4-201ENST00000294008 C1SP09871 688 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 PRF1P14222 555 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 ROM1Q03395 351 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 FCRL1Q96LA6 429 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 PCGF1Q9BSM1 259 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 PCED1AQ9H1Q7 454 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 TRABD2BA6NFA1 517 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 PTTG1O95997 202 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 PF4V1P10720 104 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 CD27P26842 260 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 PRRX1P54821 245 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 OR10Z1Q8NGY1 313 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 TMEM56Q96MV1 263 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 UBE2ZQ9H832 354 aaPredicted RBP11.3□□□□□ -0.6
SLX4-201ENST00000294008 PRSS16Q9NQE7 514 aa11.3□□□□□ -0.6
SLX4-201ENST00000294008 LSM2Q9Y333 95 aaKnown RBP11.3□□□□□ -0.6
SLX4-201ENST00000294008 GGTLC2Q14390 218 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 Q6ZN92 141 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 NPWQ8N729 165 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 SEBOXQ9HB31 216 aaPredicted RBP11.29□□□□□ -0.6
SLX4-201ENST00000294008 INPP5EQ9NRR6 644 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 OR5V1Q9UGF6 321 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 ST8SIA5O15466 376 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 FCGR2CP31995 323 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 PHOSPHO2Q8TCD6 241 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 WSB2Q9NYS7 404 aaPredicted RBP11.29□□□□□ -0.6
SLX4-201ENST00000294008 CCL26Q9Y258 94 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 TRGV5A0A0B4J1U4 118 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 A0A1B0GWA3 101 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 TRIM77I1YAP6 450 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 ZNF77Q15935 545 aa11.29□□□□□ -0.6
SLX4-201ENST00000294008 ADGRL4Q9HBW9 690 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms