RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CCDC187A0A096LP49 1063 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 TRAV14DV4A0A0A6YYC5 116 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 OR14I1A6ND48 311 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 OR5H14A6NHG9 310 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 RAB27BO00194 218 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 EIF1AYO14602 144 aaKnown RBP11.48□□□□□ -0.57
C9orf3-201ENST00000277198 BPNT1O95861 308 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 HPP00738 406 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 H2BFMP0C1H6 154 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 EIF1AXP47813 144 aaKnown RBP11.48□□□□□ -0.57
C9orf3-201ENST00000277198 UBE2MP61081 183 aaKnown RBP11.48□□□□□ -0.57
C9orf3-201ENST00000277198 RNF4P78317 190 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 MELKQ14680 651 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 TUSC1Q2TAM9 212 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 ZNF260Q3ZCT1 412 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 ZNF813Q6ZN06 617 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 RHOUQ7L0Q8 258 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 SLC25A42Q86VD7 318 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 KCNRGQ8N5I3 272 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 STEAP2Q8NFT2 490 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 OR51A2Q8NGJ7 313 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 OR13C8Q8NGS7 320 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 OR1S1Q8NH92 325 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 FAM46BQ96A09 425 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 DDIT4LQ96D03 193 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 LIN37Q96GY3 246 aaPredicted RBP11.48□□□□□ -0.57
C9orf3-201ENST00000277198 CXorf58Q96LI9 332 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 LINC00052Q96N35 136 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 PLEKHA6Q9Y2H5 1048 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 C17orf51A8MQB3 221 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 WISP1O95388 367 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 IL2RAP01589 272 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 ERCC1P07992 297 aaPredicted RBP11.48□□□□□ -0.57
C9orf3-201ENST00000277198 PRKACBP22694 351 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 CD34P28906 385 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 SPOCK1Q08629 439 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 RNASE10Q5GAN6 216 aaKnown RBP11.48□□□□□ -0.57
C9orf3-201ENST00000277198 MDGA2Q7Z553 956 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 TMED4Q7Z7H5 227 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 SLC22A24Q8N4F4 322 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 SNIP1Q8TAD8 396 aaKnown RBP11.48□□□□□ -0.57
C9orf3-201ENST00000277198 NUBPLQ8TB37 319 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 ZBTB8AQ96BR9 441 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 CHST11Q9NPF2 352 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 COMMD9Q9P000 198 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 KLHL13Q9P2N7 655 aa11.48□□□□□ -0.57
C9orf3-201ENST00000277198 A0A1W2PNV4 684 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 CDRT15L2A8MXV6 281 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 M0QYG6 137 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 MPZL1O95297 269 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 HLA-DOBP13765 273 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 HSF1Q00613 529 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 FAM189A2Q15884 450 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 C11orf87Q6NUJ2 197 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 ZNF529Q6P280 563 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 KLHL24Q6TFL4 600 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 LYG2Q86SG7 212 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 OR4D6Q8NGJ1 314 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 MITD1Q8WV92 249 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 SLC6A7Q99884 636 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 MOB1AQ9H8S9 216 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 FAM206AQ9NX38 181 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 ALKBH4Q9NXW9 302 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 FOXJ2Q9P0K8 574 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 TNFSF18Q9UNG2 199 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 SRPK3Q9UPE1 567 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 SPTBP11277 2137 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 FAM208BQ5VWN6 2430 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 KANTRA0A1W2PQU2 76 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 ALOX12BO75342 701 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 FOLR1P15328 257 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 ZBTB25P24278 435 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 MSX1P28360 303 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 QRFPP83859 136 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 TLE3Q04726 772 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 SRSF6Q13247 344 aaKnown RBP11.47□□□□□ -0.57
C9orf3-201ENST00000277198 OTPQ5XKR4 325 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 TFAP2EQ6VUC0 442 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 ADPRHL1Q8NDY3 354 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 OR10H5Q8NGA6 315 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 OR5D14Q8NGL3 314 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 OR1J2Q8NGS2 313 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 RNF138Q8WVD3 245 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 ST8SIA2Q92186 375 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 DNAJA3Q96EY1 480 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 LDAHQ9H6V9 325 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 CNTD2Q9H8S5 307 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 RASL12Q9NYN1 266 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 SLC5A6Q9Y289 635 aa11.47□□□□□ -0.57
C9orf3-201ENST00000277198 RPH3AQ9Y2J0 694 aaPredicted RBP11.47□□□□□ -0.57
C9orf3-201ENST00000277198 IGSF10Q6WRI0 2623 aa11.46□□□□□ -0.57
C9orf3-201ENST00000277198 IGLV3-12A0A075B6K2 115 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 TMEM235A6NFC5 223 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 VSTM2BA6NLU5 285 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 WDPCPO95876 746 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 HLA-AP01891 365 aaKnown RBP11.46□□□□□ -0.58
C9orf3-201ENST00000277198 CHRM2P08172 466 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 CXADRP78310 365 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 TGIF1Q15583 401 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 OR7A5Q15622 319 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms