RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 UQCC1Q9NVA1 299 aa9.21□□□□□ -0.93
UPF3B-201ENST00000276201 VSIG4Q9Y279 399 aa9.21□□□□□ -0.93
UPF3B-201ENST00000276201 CFAP47Q6ZTR5 3102 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 MEX3AA1L020 520 aaKnown RBP9.21□□□□□ -0.94
UPF3B-201ENST00000276201 H3BMH7 237 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 SCRG1O75711 98 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 DUS4LO95620 317 aaKnown RBP9.21□□□□□ -0.94
UPF3B-201ENST00000276201 ACTL6AO96019 429 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 PSMB6P28072 239 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 IGLV3-21P80748 117 aaPredicted RBP9.21□□□□□ -0.94
UPF3B-201ENST00000276201 ECH1Q13011 328 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 MST1LQ2TV78 715 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 C6orf15Q6UXA7 325 aaPredicted RBP9.21□□□□□ -0.94
UPF3B-201ENST00000276201 RNF44Q7L0R7 432 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 LYPD6Q86Y78 171 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 C15orf54Q8N8G6 183 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 TMEM52Q8NDY8 209 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 OR10AC1Q8NH08 325 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 OR6S1Q8NH40 331 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 DVL3Q92997 716 aaPredicted RBP9.21□□□□□ -0.94
UPF3B-201ENST00000276201 FOXRED1Q96CU9 486 aaPredicted RBP9.21□□□□□ -0.94
UPF3B-201ENST00000276201 SLC6A7Q99884 636 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF251Q9BRH9 671 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 TCEAL7Q9BRU2 100 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 FBLN5Q9UBX5 448 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 MPDZO75970 2070 aa9.21□□□□□ -0.94
UPF3B-201ENST00000276201 ZFYVE26Q68DK2 2539 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 LOC101059948A0A1B0GTJ6 334 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 CEACAM18A8MTB9 384 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 SIGLEC5O15389 551 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 CTSVO60911 334 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 AKR7A3O95154 331 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 HLA-AP01891 365 aaKnown RBP9.2□□□□□ -0.94
UPF3B-201ENST00000276201 CRYBA1P05813 215 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 LIFP15018 202 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 HTR2CP28335 458 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 UCNP55089 124 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 TMPRSS3P57727 454 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 CTXN1P60606 82 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 EIF5AP63241 154 aaKnown RBP9.2□□□□□ -0.94
UPF3B-201ENST00000276201 PMPCAQ10713 525 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 COL9A2Q14055 689 aaPredicted RBP9.2□□□□□ -0.94
UPF3B-201ENST00000276201 ALG10Q5BKT4 473 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 FNDC7Q5VTL7 733 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 TMEM225Q6GV28 225 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 ASPHD2Q6ICH7 369 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 MISPQ8IVT2 679 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 IL22RA1Q8N6P7 574 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 SLC38A9Q8NBW4 561 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 OR4K17Q8NGC6 315 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 OR4A4PQ8NGN8 299 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 ZCCHC10Q8TBK6 192 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 SMIM8Q96KF7 97 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 PRORYQ9H606 182 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 MMP25Q9NPA2 562 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 RCC2Q9P258 522 aaKnown RBP9.2□□□□□ -0.94
UPF3B-201ENST00000276201 ASH2LQ9UBL3 628 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 DNAJB11Q9UBS4 358 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 IKZF2Q9UKS7 526 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 PSMD9O00233 223 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 UBE2CO00762 179 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF208O43345 1280 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 GRPRP30550 384 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 AQP2P41181 271 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 CAV2P51636 162 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 RAB5BP61020 215 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 ID2Q02363 134 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 HMGN3Q15651 99 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 NSUN5P2Q63ZY6 315 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 PAPD4Q6PIY7 484 aaKnown RBP9.2□□□□□ -0.94
UPF3B-201ENST00000276201 TMED4Q7Z7H5 227 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 CBLN2Q8IUK8 224 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF584Q8IVC4 421 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF679Q8IYX0 411 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 NKAIN3Q8N8D7 197 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 OR8S1Q8NH09 359 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 RXFP4Q8TDU9 374 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 TSEN15Q8WW01 171 aaKnown RBP9.2□□□□□ -0.94
UPF3B-201ENST00000276201 ZFYVE21Q9BQ24 234 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 NRIP2Q9BQI9 281 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 TLNRD1Q9H1K6 362 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 TUBA4BQ9H853 241 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 AKIRIN1Q9H9L7 192 aaPredicted RBP9.2□□□□□ -0.94
UPF3B-201ENST00000276201 SEBOXQ9HB31 216 aaPredicted RBP9.2□□□□□ -0.94
UPF3B-201ENST00000276201 CKLFQ9UBR5 152 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 ANAPC10Q9UM13 185 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 RHBDD3Q9Y3P4 386 aa9.2□□□□□ -0.94
UPF3B-201ENST00000276201 CPAMD8Q8IZJ3 1885 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 COLCA2A8K830 154 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 TERTO14746 1132 aaKnown RBP9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ALOX12BO75342 701 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 CSTAP01040 98 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 CD2P06729 351 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ACAA1P09110 424 aaPredicted RBP9.19□□□□□ -0.94
UPF3B-201ENST00000276201 SPP1P10451 314 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 POLR2GP62487 172 aaKnown RBP eCLIP9.19□□□□□ -0.94
UPF3B-201ENST00000276201 SWI5Q1ZZU3 235 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF260Q3ZCT1 412 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 KLHL26Q53HC5 615 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 MESTQ5EB52 335 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms