RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 RPL29P47914 159 aaKnown RBP7.08□□□□□ -1.28
USP3-201ENST00000268049 RNF144AP50876 292 aaPredicted RBP7.08□□□□□ -1.28
USP3-201ENST00000268049 METAP1P53582 386 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 FXYD4P59646 89 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 LCN6P62502 163 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 NUMA1Q14980 2115 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 C18orf21Q32NC0 220 aaPredicted RBP7.08□□□□□ -1.28
USP3-201ENST00000268049 PAGE3Q5JUK9 113 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 MARCH3Q86UD3 253 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 SFTPA2Q8IWL1 248 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 ALG14Q96F25 216 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 OXGR1Q96P68 337 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 VAMP8Q9BV40 100 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 PITPNC1Q9UKF7 332 aa7.08□□□□□ -1.28
USP3-201ENST00000268049 MN1Q10571 1320 aaPredicted RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 H0Y8G0 127 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 DCTN6O00399 190 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 SH2D1BO14796 132 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 GPR137BO60478 399 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 OR2F2O95006 317 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 ZNF728P0DKX0 622 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 CSF2RBP32927 897 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 LIMK1P53667 647 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 TNFAIP6P98066 277 aaPredicted RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 TMEM267Q0VDI3 215 aaPredicted RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 OR2F1Q13607 317 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 ZNF74Q16587 644 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 TAF9Q16594 264 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 MOGAT2Q3SYC2 334 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 SIGLECL1Q8N7X8 197 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 TP53I13Q8NBR0 393 aaPredicted RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 LHFPL5Q8TAF8 219 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 SLC38A5Q8WUX1 472 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 SDSLQ96GA7 329 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 SORT1Q99523 831 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 OCIAD1Q9NX40 245 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 PPIL1Q9Y3C6 166 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 MMP7P09237 267 aaPredicted RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 SERPINA2P20848 420 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 HOXA6P31267 233 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 SOX18P35713 384 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 HOXA1P49639 335 aaPredicted RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 C1orf140Q5VVS0 124 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 NPSR1Q6W5P4 371 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 SLC35D2Q76EJ3 337 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 ANKRD37Q7Z713 158 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 SHISA5Q8N114 240 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 GPR119Q8TDV5 335 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 HSD17B8Q92506 261 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 MAL2Q969L2 176 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 ISL2Q96A47 359 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 PDLIM5Q96HC4 596 aaKnown RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 TRAF4Q9BUZ4 470 aaPredicted RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 LAT2Q9GZY6 243 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 PLEKHJ1Q9NW61 149 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 A0A0G2JMZ2 1700 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 TDRD15B5MCY1 1934 aaKnown RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 TRAV38-1A0A0B4J264 116 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 CTRB1P17538 263 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 CSNK1G2P78368 415 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 SLC9A3R2Q15599 337 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 MPEG1Q2M385 716 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 TP53I3Q53FA7 332 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 CTRB2Q6GPI1 263 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 FAM57BQ71RH2 274 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 LSRQ86X29 649 aaPredicted RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 OR1L3Q8NH93 324 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 CCL4L1Q8NHW4 92 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 APH1BQ8WW43 257 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 PATE1Q8WXA2 126 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 RPEQ96AT9 228 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 RASD2Q96D21 266 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 CMSS1Q9BQ75 279 aaKnown RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 PSORS1C1Q9UIG5 152 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 G3V2L1 256 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 H7BYZ3 331 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 M0QZK8 103 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 TRAF3IP2O43734 574 aaPredicted RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 SLC16A7O60669 478 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 PRAMEF4O60810 478 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 GGCTO75223 188 aaKnown RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 SP1P08047 785 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 CTSSP25774 331 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 ZXDBP98169 803 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 GSG1Q2KHT4 349 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 CPOQ8IVL8 374 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 SPACA3Q8IXA5 215 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 FAM26EQ8N5C1 309 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 DEFB108BQ8NET1 73 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 DUS3LQ96G46 650 aaKnown RBP7.07□□□□□ -1.28
USP3-201ENST00000268049 AKIP1Q9NQ31 210 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 IGSF5Q9NSI5 407 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 ELOVL5Q9NYP7 299 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 EP400Q96L91 3159 aa7.07□□□□□ -1.28
USP3-201ENST00000268049 TRGV10A0A0A0MS01 117 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 OR6C68A6NDL8 312 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 NCBP2LA6PVI3 153 aaKnown RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 TNFSF11O14788 317 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 MSTNO14793 375 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 SPRY3O43610 288 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms