RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 LAMP2P13473 410 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 FOSL2P15408 326 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 KHKP50053 298 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 TAS2R19P59542 299 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 ZNF616Q08AN1 781 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 NFATC4Q14934 902 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 MFSD12Q6NUT3 480 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 ARMC6Q6NXE6 501 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 CPEB3Q8NE35 698 aaKnown RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 OR4C6Q8NH72 309 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 OR5R1Q8NH85 324 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 BPIFA2Q96DR5 249 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 NUS1Q96E22 293 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 CNRIP1Q96F85 164 aaPredicted RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 CNN2Q99439 309 aaKnown RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 TCEAL2Q9H3H9 227 aaPredicted RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 PARP11Q9NR21 331 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 SEMA5BQ9P283 1151 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 ETV7Q9Y603 341 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 URB1O60287 2271 aaKnown RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 TVP23AA6NH52 213 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 DUXAA6NLW8 204 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 H0YL77 283 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 CISD3P0C7P0 127 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 SELEP16581 610 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 THBS4P35443 961 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 MC3RP41968 323 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 NKX6-1P78426 367 aaPredicted RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 TGM3Q08188 693 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 SLC10A1Q14973 349 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 SLC9A3R2Q15599 337 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 HNRNPA1L2Q32P51 320 aaKnown RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 ITPRIPL2Q3MIP1 535 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 NKAIN1Q4KMZ8 207 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 ARSJQ5FYB0 599 aaPredicted RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 RNASE10Q5GAN6 216 aaKnown RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 TMEM268Q5VZI3 342 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 LEG1Q6P5S2 330 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 ZNF793Q6ZN11 406 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 GALNTL5Q7Z4T8 443 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 METTL27Q8N6F8 245 aaPredicted RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 LYPD6BQ8NI32 183 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 TMEM239Q8WW34 195 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 RAB24Q969Q5 203 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 TMEM106AQ96A25 262 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 NMNAT3Q96T66 252 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 PHB2Q99623 299 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 SLC25A21Q9BQT8 299 aaPredicted RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 POTEKPQ9BYX7 375 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 Q9N2J8 555 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 PDE7BQ9NP56 450 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 UPB1Q9UBR1 384 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 ABCA7Q8IZY2 2146 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 A0A087WUJ7 227 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 A0A087WZY1 265 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 ZNF736B4DX44 427 aaPredicted RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 C1QTNF3-AMACRE9PGA6 284 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 ZNF354AO60765 605 aaPredicted RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 KLF8O95600 359 aaPredicted RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 PTBP3O95758 552 aaKnown RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 TSPAN15O95858 294 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 PPP1CCP36873 323 aaKnown RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 ACTC1P68032 377 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 ACTA1P68133 377 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 TFF2Q03403 129 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 ELAVL3Q14576 367 aaKnown RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 ELOCQ15369 112 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 RHEBQ15382 184 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 TOMM34Q15785 309 aaPredicted RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 ZNF542PQ5EBM4 170 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 C9orf64Q5T6V5 341 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 Q7L0L9 218 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 TDHQ8IZJ6 230 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 SYS1Q8N2H4 156 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 LINC01555Q8NAE3 123 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 SLC16A11Q8NCK7 471 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 RPS4Y2Q8TD47 263 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 GRHL3Q8TE85 626 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 HPSE2Q8WWQ2 592 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 R3HDM4Q96D70 268 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 SLC35A4Q96G79 324 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 SCARF2Q96GP6 870 aaPredicted RBP7.85□□□□□ -1.15
VAPB-201ENST00000265619 WFIKKN1Q96NZ8 548 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 DCBLD2Q96PD2 775 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 FAM83CQ9BQN1 747 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 ASCL3Q9NQ33 180 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 HAO2Q9NYQ3 351 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 KCNK6Q9Y257 313 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 DYRK1BQ9Y463 629 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 FRYLO94915 3013 aa7.85□□□□□ -1.15
VAPB-201ENST00000265619 EDDM13A0A1B0GTR0 161 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 SMCO3A2RU48 225 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 PEX12O00623 359 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 AMBPP02760 352 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 CATP04040 527 aaKnown RBP7.84□□□□□ -1.15
VAPB-201ENST00000265619 OR2T7P0C7T2 308 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 AK4P27144 223 aaPredicted RBP7.84□□□□□ -1.15
VAPB-201ENST00000265619 RBX1P62877 108 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 CCL20P78556 96 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 JOSD1Q15040 202 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms