RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 FAHD2BQ6P2I3 314 aaPredicted RBP13.53□□□□□ -0.24
DDX56-201ENST00000258772 WDR74Q6RFH5 385 aaPredicted RBP13.53□□□□□ -0.24
DDX56-201ENST00000258772 CFAP77Q6ZQR2 320 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 SLC38A9Q8NBW4 561 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 OR51E1Q8TCB6 317 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 FAHD2AQ96GK7 314 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 ZNF768Q9H5H4 540 aaKnown RBP13.53□□□□□ -0.24
DDX56-201ENST00000258772 DUX4Q9UBX2 424 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 PISDQ9UG56 409 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 ADAMTS9Q9P2N4 1935 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 EFSO43281 561 aa13.52□□□□□ -0.24
DDX56-201ENST00000258772 SSX5O60225 188 aa13.52□□□□□ -0.24
DDX56-201ENST00000258772 MYBPHQ13203 477 aa13.52□□□□□ -0.24
DDX56-201ENST00000258772 ATXN7L3Q14CW9 347 aaPredicted RBP13.52□□□□□ -0.24
DDX56-201ENST00000258772 RNF144BQ7Z419 303 aa13.52□□□□□ -0.24
DDX56-201ENST00000258772 ADAD2Q8NCV1 583 aaKnown RBP13.52□□□□□ -0.24
DDX56-201ENST00000258772 RNF138Q8WVD3 245 aa13.52□□□□□ -0.24
DDX56-201ENST00000258772 ZNF75AQ96N20 296 aa13.52□□□□□ -0.24
DDX56-201ENST00000258772 NUDT16L1Q9BRJ7 211 aaKnown RBP13.52□□□□□ -0.24
DDX56-201ENST00000258772 BARX1Q9HBU1 254 aaPredicted RBP13.52□□□□□ -0.24
DDX56-201ENST00000258772 KLRF1Q9NZS2 232 aa13.52□□□□□ -0.24
DDX56-201ENST00000258772 SRPK3Q9UPE1 567 aa13.52□□□□□ -0.24
DDX56-201ENST00000258772 LHFPL6Q9Y693 200 aa13.52□□□□□ -0.24
DDX56-201ENST00000258772 MTCH2Q9Y6C9 303 aa13.52□□□□□ -0.24
DDX56-201ENST00000258772 PRUNE2Q8WUY3 3088 aa13.52□□□□□ -0.24
DDX56-201ENST00000258772 FAM25EA8MYX2 175 aa13.52□□□□□ -0.25
DDX56-201ENST00000258772 IFNA6P05013 189 aa13.52□□□□□ -0.25
DDX56-201ENST00000258772 GIMD1P0DJR0 217 aa13.52□□□□□ -0.25
DDX56-201ENST00000258772 DLSTP36957 453 aa13.52□□□□□ -0.25
DDX56-201ENST00000258772 FOXK1P85037 733 aa13.52□□□□□ -0.25
DDX56-201ENST00000258772 ZNF273Q14593 569 aa13.52□□□□□ -0.25
DDX56-201ENST00000258772 PTCRAQ6ISU1 281 aaPredicted RBP13.52□□□□□ -0.25
DDX56-201ENST00000258772 RTN4RL2Q86UN3 420 aa13.52□□□□□ -0.25
DDX56-201ENST00000258772 NICN1Q9BSH3 213 aa13.52□□□□□ -0.25
DDX56-201ENST00000258772 ZNF471Q9BX82 626 aaPredicted RBP13.52□□□□□ -0.25
DDX56-201ENST00000258772 SEC61A2Q9H9S3 476 aa13.52□□□□□ -0.25
DDX56-201ENST00000258772 C12orf4Q9NQ89 552 aa13.52□□□□□ -0.25
DDX56-201ENST00000258772 PPP4R1LQ9P1A2 415 aa13.52□□□□□ -0.25
DDX56-201ENST00000258772 TRBV11-1A0A0K0K1C0 115 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 AKR1C4P17516 323 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 TBPP20226 339 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 VAMP1P23763 118 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 CASRP41180 1078 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 ZNF41P51814 821 aaPredicted RBP13.51□□□□□ -0.25
DDX56-201ENST00000258772 PRKXP51817 358 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 EMP2P54851 167 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 SLC25A53Q5H9E4 307 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 UEVLDQ8IX04 471 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 ZNF101Q8IZC7 436 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 THAP6Q8TBB0 222 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 POC1BQ8TC44 478 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 CASTOR1Q8WTX7 329 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 MRGPRX4Q96LA9 322 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 SPACA5Q96QH8 159 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 FN3KRPQ9HA64 309 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 SDHAF3Q9NRP4 125 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 PMP2P02689 132 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 OPN1LWP04000 364 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 CHRM2P08172 466 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 ABOP16442 354 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 ZNF20P17024 532 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 MSX1P28360 303 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 CLRN1P58418 232 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 MFAP5Q13361 173 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 PLPPR5Q32ZL2 321 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 KCTD9Q7L273 389 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 RABEPKQ7Z6M1 372 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 IQCF2Q8IXL9 164 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 PHYHIPLQ96FC7 376 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 SOX7Q9BT81 388 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 LPAR5Q9H1C0 372 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 ZNF576Q9H609 170 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 POLR1DQ9Y2S0 133 aa13.51□□□□□ -0.25
DDX56-201ENST00000258772 ZNF878C9JN71 531 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 DUS4LO95620 317 aaKnown RBP13.5□□□□□ -0.25
DDX56-201ENST00000258772 APOC3P02656 99 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 PGA4P0DJD7 388 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 PGA3P0DJD8 388 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 NKAIN1Q4KMZ8 207 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 GLIPR1L1Q6UWM5 242 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 OR2W3Q7Z3T1 314 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 OR2AJ1Q8NGZ0 328 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 OR4K15Q8NH41 348 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 TAS2R3Q9NYW6 316 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 A0A0A6YYD4 124 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 DBX1A6NMT0 343 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 EEF1E1-BLOC1S5C9J1V9 151 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 SULT2B1O00204 365 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 IGHG1P01857 330 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 CNR1P21554 472 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 BCKDHBP21953 392 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 CDAP32320 146 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 PTGDSP41222 190 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 P2RY4P51582 365 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 SMAD2Q15796 467 aaKnown RBP13.5□□□□□ -0.25
DDX56-201ENST00000258772 ELP2Q6IA86 826 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 TMPRSS9Q7Z410 1059 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 OR5AS1Q8N127 324 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 INO80EQ8NBZ0 244 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms