RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 PAQR8Q8TEZ7 354 aa16.52■□□□□ 0.24
PDLIM4-201ENST00000253754 GPN1Q9HCN4 374 aaPredicted RBP16.52■□□□□ 0.24
PDLIM4-201ENST00000253754 SH2D2AQ9NP31 389 aa16.52■□□□□ 0.24
PDLIM4-201ENST00000253754 PTTG3PQ9NZH4 202 aa16.52■□□□□ 0.24
PDLIM4-201ENST00000253754 SLC5A6Q9Y289 635 aa16.52■□□□□ 0.24
PDLIM4-201ENST00000253754 SPAARA0A1B0GVQ0 90 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 E9PLN8 166 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 SIX6O95475 246 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 CD63P08962 238 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 CPN1P15169 458 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 H3F3AP84243 136 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 SGCAQ16586 387 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 ZNF239Q16600 458 aaKnown RBP16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 ZBTB37Q5TC79 503 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 GLRX5Q86SX6 157 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 FTMTQ8N4E7 242 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 UXS1Q8NBZ7 420 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 MED30Q96HR3 178 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 FAM71F1Q96KD3 344 aaPredicted RBP16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 PRRX2Q99811 253 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 TMEM138Q9NPI0 162 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 HPF1Q9NWY4 346 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 DKKL1Q9UK85 242 aa16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 FARSAQ9Y285 508 aaKnown RBP16.52■□□□□ 0.23
PDLIM4-201ENST00000253754 FRYQ5TBA9 3013 aa16.51■□□□□ 0.23
PDLIM4-201ENST00000253754 WDPCPO95876 746 aa16.51■□□□□ 0.23
PDLIM4-201ENST00000253754 MLF1P58340 268 aa16.51■□□□□ 0.23
PDLIM4-201ENST00000253754 ACTBP60709 375 aa16.51■□□□□ 0.23
PDLIM4-201ENST00000253754 ACTG1P63261 375 aa16.51■□□□□ 0.23
PDLIM4-201ENST00000253754 TEX261Q6UWH6 196 aa16.51■□□□□ 0.23
PDLIM4-201ENST00000253754 OR4S1Q8NGB4 309 aa16.51■□□□□ 0.23
PDLIM4-201ENST00000253754 ZNF416Q9BWM5 594 aa16.51■□□□□ 0.23
PDLIM4-201ENST00000253754 GPR84Q9NQS5 396 aa16.51■□□□□ 0.23
PDLIM4-201ENST00000253754 U3KQ87 197 aa16.51■□□□□ 0.23
PDLIM4-201ENST00000253754 A0A087WZY1 265 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 TNFSF15O95150 251 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 PMS2P2O95744 297 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 VSIG8P0DPA2 414 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 CX3CR1P49238 355 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 DSCR4P56555 118 aaPredicted RBP16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 TSPAN5P62079 268 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 HDDC2Q7Z4H3 204 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 SPICQ8N5J4 248 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 ZNF775Q96BV0 537 aaPredicted RBP16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 CYYR1Q96J86 154 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 DPCDQ9BVM2 203 aaPredicted RBP16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 EXO5Q9H790 373 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 CNTRLQ7Z7A1 2325 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 SNRPGP15A8MWD9 76 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 RAB27BO00194 218 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 TNFSF11O14788 317 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 MPC2O95563 127 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 RAB3DO95716 219 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 ZNF20P17024 532 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 RAB3AP20336 220 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 ENPP1P22413 925 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 TAS2R19P59542 299 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 FAM57BQ71RH2 274 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 PPP1R32Q7Z5V6 425 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 NAA40Q86UY6 237 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 MUC20Q8N307 709 aaPredicted RBP16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 OR5D14Q8NGL3 314 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 FOXRED1Q96CU9 486 aaPredicted RBP16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 CITED4Q96RK1 184 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 GLTPQ9NZD2 209 aa16.5■□□□□ 0.23
PDLIM4-201ENST00000253754 IGHEP01854 428 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 CSN2P05814 226 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 FTH1P19P0C7X4 201 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 ZNF17P17021 662 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 QRFPP83859 136 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 Q0VFX4 171 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 SLC22A6Q4U2R8 563 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 IDO2Q6ZQW0 420 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 CHMP1BQ7LBR1 199 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 SLC22A24Q8N4F4 322 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 ZNF680Q8NEM1 530 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 LOC102725191A0A1B0GVB3 256 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 AMY2AP04746 511 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 CSNK1A1P48729 337 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 H2BFSP57053 126 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 RSPO4Q2I0M5 234 aaPredicted RBP16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 ZNF529Q6P280 563 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 TMEM81Q6P7N7 255 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 LRRC18Q8N456 261 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 ESX1Q8N693 406 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 ZNF283Q8N7M2 679 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 TMEM229BQ8NBD8 167 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 CHST4Q8NCG5 386 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 IRF2BPLQ9H1B7 796 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 POFUT1Q9H488 388 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 LOC400499M0QZD8 3231 aa16.49■□□□□ 0.23
PDLIM4-201ENST00000253754 A0A0J9YW62 118 aa16.48■□□□□ 0.23
PDLIM4-201ENST00000253754 SULT1C2O00338 296 aa16.48■□□□□ 0.23
PDLIM4-201ENST00000253754 SLC34A2O95436 690 aa16.48■□□□□ 0.23
PDLIM4-201ENST00000253754 ZNF93P35789 620 aaPredicted RBP16.48■□□□□ 0.23
PDLIM4-201ENST00000253754 SSPNQ14714 243 aa16.48■□□□□ 0.23
PDLIM4-201ENST00000253754 KCNMB1Q16558 191 aa16.48■□□□□ 0.23
PDLIM4-201ENST00000253754 NKPD1Q17RQ9 610 aa16.48■□□□□ 0.23
PDLIM4-201ENST00000253754 AWAT2Q6E213 333 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms