RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PLPP7Q8NBV4 271 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 OR5L1Q8NGL2 311 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 SPSB4Q96A44 273 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 PGAM5Q96HS1 289 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 KCTD7Q96MP8 289 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 PDCD1LG2Q9BQ51 273 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 TMED9Q9BVK6 235 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 OR51E2Q9H255 320 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 NOX3Q9HBY0 568 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 KCNJ16Q9NPI9 418 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 EIF3KQ9UBQ5 218 aaKnown RBP11.23□□□□□ -0.61
LSM8-201ENST00000249299 ZFYVE26Q68DK2 2539 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 NCOA6Q14686 2063 aaPredicted RBP11.22□□□□□ -0.61
LSM8-201ENST00000249299 TRAV1-2A0A0B4J238 106 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 PNMA8CA0A1B0GUJ8 204 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 C5orf49A4QMS7 147 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 CCDC160A6NGH7 325 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 ZNF879B4DU55 563 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 H3BMQ9 156 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 GABRPO00591 440 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 LCE2BO14633 110 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 UCHL1P09936 223 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 EPXP11678 715 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 APEX1P27695 318 aaKnown RBP11.22□□□□□ -0.61
LSM8-201ENST00000249299 ZMAT1Q5H9K5 638 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 FOXB2Q5VYV0 432 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 TMEM91Q6ZNR0 172 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 USP43Q70EL4 1123 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 FAM57BQ71RH2 274 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 TPRA1Q86W33 373 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 KBTBD8Q8NFY9 601 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 OR8B12Q8NGG6 310 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 AKAP1Q92667 903 aaKnown RBP eCLIP11.22□□□□□ -0.61
LSM8-201ENST00000249299 TMEM203Q969S6 136 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 C12orf43Q96C57 262 aaKnown RBP11.22□□□□□ -0.61
LSM8-201ENST00000249299 CHCHD6Q9BRQ6 235 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 MED18Q9BUE0 208 aa11.22□□□□□ -0.61
LSM8-201ENST00000249299 TXNL4BQ9NX01 149 aaKnown RBP11.22□□□□□ -0.61
LSM8-201ENST00000249299 KMT2BQ9UMN6 2715 aaPredicted RBP11.21□□□□□ -0.61
LSM8-201ENST00000249299 TRBV5-7A0A0A0MS05 114 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 A0A1B0GVI7 797 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 LOC107986453A0A1B0GWG9 222 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 IL1AP01583 271 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 LCATP04180 440 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 DBHP09172 617 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 OCM2P0CE71 109 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 PTAFRP25105 342 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 CCKARP32238 428 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 RAD52P43351 418 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 RANBP1P43487 201 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 MALLQ13021 153 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 TSC22D1Q15714 1073 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 TAB1Q15750 504 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 IGFBP7Q16270 282 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 ZBTB37Q5TC79 503 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 SEZ6L2Q6UXD5 910 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 NCCRP1Q6ZVX7 275 aaPredicted RBP11.21□□□□□ -0.61
LSM8-201ENST00000249299 KRT74Q7RTS7 529 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 CEACAM19Q7Z692 300 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 BCL2L14Q9BZR8 327 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 CDH20Q9HBT6 801 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 EXOSC4Q9NPD3 245 aaKnown RBP11.21□□□□□ -0.61
LSM8-201ENST00000249299 NDRG3Q9UGV2 375 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 GTF2A1LQ9UNN4 478 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 CACNA1CQ13936 2221 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 NBASA2RRP1 2371 aa11.21□□□□□ -0.61
LSM8-201ENST00000249299 LOC100506127A0A0U1RQW1 187 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 A0A1B0GTI1 187 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 SYT7O43581 403 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 DHRS3O75911 302 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 C1QL1O75973 258 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 ALX3O95076 343 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 ZNF35P13682 527 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 DDOSTP39656 456 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 MTNR1BP49286 362 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 IDH3GP51553 393 aaPredicted RBP11.2□□□□□ -0.62
LSM8-201ENST00000249299 PSMD7P51665 324 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 PARP16Q8N5Y8 322 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 SLC7A6Q92536 515 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 RGP1Q92546 391 aaPredicted RBP11.2□□□□□ -0.62
LSM8-201ENST00000249299 RPL3LQ92901 407 aaKnown RBP11.2□□□□□ -0.62
LSM8-201ENST00000249299 DERL3Q96Q80 235 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 KCNS3Q9BQ31 491 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 CENPOQ9BU64 300 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 NAA50Q9GZZ1 169 aaKnown RBP11.2□□□□□ -0.62
LSM8-201ENST00000249299 ZNF275Q9NSD4 429 aaPredicted RBP11.2□□□□□ -0.62
LSM8-201ENST00000249299 DHDHQ9UQ10 334 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 SPEF1Q9Y4P9 236 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 ESPL1Q14674 2120 aa11.2□□□□□ -0.62
LSM8-201ENST00000249299 IGHV1-18A0A0C4DH31 117 aa11.19□□□□□ -0.62
LSM8-201ENST00000249299 MEGF11A6BM72 1044 aa11.19□□□□□ -0.62
LSM8-201ENST00000249299 CLDN14O95500 239 aa11.19□□□□□ -0.62
LSM8-201ENST00000249299 CECR9P0C854 216 aa11.19□□□□□ -0.62
LSM8-201ENST00000249299 FSTP19883 344 aa11.19□□□□□ -0.62
LSM8-201ENST00000249299 UQCRFS1P47985 274 aa11.19□□□□□ -0.62
LSM8-201ENST00000249299 HSD17B12Q53GQ0 312 aa11.19□□□□□ -0.62
LSM8-201ENST00000249299 C22orf42Q6IC83 251 aa11.19□□□□□ -0.62
LSM8-201ENST00000249299 TMEM108Q6UXF1 575 aa11.19□□□□□ -0.62
LSM8-201ENST00000249299 FBXW12Q6X9E4 464 aa11.19□□□□□ -0.62
LSM8-201ENST00000249299 CROCCP3Q8IVE0 287 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms