RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 AKR7LQ8NHP1 331 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 FAM57AQ8TBR7 257 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 LGALS14Q8TCE9 139 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 CHPT1Q8WUD6 406 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 RAB40AQ8WXH6 277 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 BCL2L2Q92843 193 aaPredicted RBP12.39□□□□□ -0.43
SDF2-201ENST00000247020 FGGYQ96C11 551 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 LIN7BQ9HAP6 207 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 PLEKHA1Q9HB21 404 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 PLSCR4Q9NRQ2 329 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 EXTL2Q9UBQ6 330 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 ASPMQ8IZT6 3477 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 H3BSH0 61 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 XRCC2O43543 280 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 EIF4EP06730 217 aaKnown RBP12.38□□□□□ -0.43
SDF2-201ENST00000247020 DBHP09172 617 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 SNRPBP14678 240 aaKnown RBP12.38□□□□□ -0.43
SDF2-201ENST00000247020 RAB3AP20336 220 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 BDKRB2P30411 391 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 THBS4P35443 961 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 TIMP3P35625 211 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 TDGF1P3P51864 188 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 FOXG1P55316 489 aaPredicted RBP12.38□□□□□ -0.43
SDF2-201ENST00000247020 IL18Q14116 193 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 C1orf100Q5SVJ3 147 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 C1orf185Q5T7R7 199 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 Q8NA96 180 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 OR1M1Q8NGA1 313 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 OR5H6Q8NGV6 325 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 SETD6Q8TBK2 473 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 PP6455Q8WZ26 134 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 ADAT3Q96EY9 351 aaPredicted RBP12.38□□□□□ -0.43
SDF2-201ENST00000247020 UQCC2Q9BRT2 126 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 C1QTNF5Q9BXJ0 243 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 ABCG5Q9H222 651 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 TMEM138Q9NPI0 162 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 ABCB10Q9NRK6 738 aa12.38□□□□□ -0.43
SDF2-201ENST00000247020 ALDOBP05062 364 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 PATE4P0C8F1 98 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 COX5AP20674 150 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 GNALP38405 381 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 DEFA1P59665 94 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 DEFA3P59666 94 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 PLP2Q04941 152 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 RAB11BQ15907 218 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 C9orf135Q5VTT2 229 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 PYHIN1Q6K0P9 492 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 COLCA1Q6ZS62 124 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 UTS2BQ765I0 119 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 NAA40Q86UY6 237 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 LYPD6Q86Y78 171 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 GCNT2Q8N0V5 402 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 SLC7A6Q92536 515 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 LYZL4Q96KX0 146 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 SORCS2Q96PQ0 1159 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 B3GNT2Q9NY97 397 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 OR5V1Q9UGF6 321 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 LOC400499M0QZD8 3231 aa12.37□□□□□ -0.43
SDF2-201ENST00000247020 SPTBN2O15020 2390 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 A0A096LPE4 126 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 A0A1W2PPZ6 126 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 J3QW42 95 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 SULT1B1O43704 296 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 HLA-DQB1P01920 261 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 LCATP04180 440 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 TPOP07202 933 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 HTR2CP28335 458 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 HOXD11P31277 338 aaPredicted RBP12.36□□□□□ -0.43
SDF2-201ENST00000247020 PITPNBP48739 271 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 RAB1AP62820 205 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 PITPNAQ00169 270 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 GSG1Q2KHT4 349 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 TBRG1Q3YBR2 411 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 PYDC2Q56P42 97 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 SFRP5Q5T4F7 317 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 STEAP3Q658P3 488 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 CD163Q86VB7 1156 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 CNEP1R1Q8N9A8 125 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 CPEB3Q8NE35 698 aaKnown RBP12.36□□□□□ -0.43
SDF2-201ENST00000247020 DNAAF1Q8NEP3 725 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 OR4M1Q8NGD0 313 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 C15orf40Q8WUR7 153 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 AKAP1Q92667 903 aaKnown RBP eCLIP12.36□□□□□ -0.43
SDF2-201ENST00000247020 FAM71F1Q96KD3 344 aaPredicted RBP12.36□□□□□ -0.43
SDF2-201ENST00000247020 SLX1AQ9BQ83 275 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 METTL17Q9H7H0 456 aaPredicted RBP12.36□□□□□ -0.43
SDF2-201ENST00000247020 N6AMT1Q9Y5N5 214 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 CELSR3Q9NYQ7 3312 aa12.36□□□□□ -0.43
SDF2-201ENST00000247020 E9PLN8 166 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 LMX1BO60663 402 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 IL2RAP01589 272 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 HLA-HP01893 362 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 SERPINA5P05154 406 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 CD79AP11912 226 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 IL7P13232 177 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 ABOP16442 354 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 IGHV1-2P23083 117 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 MNDAP41218 407 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 PER3P56645 1201 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 HGFACQ04756 655 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms