RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 ABRACLQ9P1F3 81 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 CAMK2AQ9UQM7 478 aa7.64□□□□□ -1.19
VPS4B-201ENST00000238497 MTORP42345 2549 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 LOC107986453A0A1B0GWG9 222 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 AIPO00170 330 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 TNFSF11O14788 317 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 FABP7O15540 132 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 UBL3O95164 117 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 APOBEC1P41238 236 aaKnown RBP7.63□□□□□ -1.19
VPS4B-201ENST00000238497 AP2S1P53680 142 aaPredicted RBP7.63□□□□□ -1.19
VPS4B-201ENST00000238497 ADORA2A-AS1P86434 159 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 C2orf76Q3KRA6 126 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 CCDC58Q4VC31 144 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 DNM1P34Q6PK57 102 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 FAM57BQ71RH2 274 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 PXKQ7Z7A4 578 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 ARMC10Q8N2F6 343 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 GIMAP1Q8WWP7 306 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 ROBO4Q8WZ75 1007 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 AKAP1Q92667 903 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS4B-201ENST00000238497 YIPF5Q969M3 257 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 C4orf45Q96LM5 186 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 DIABLOQ9NR28 239 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 OR52A1Q9UKL2 312 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 CHCHD2Q9Y6H1 151 aaPredicted RBP7.63□□□□□ -1.19
VPS4B-201ENST00000238497 NBPF19A0A087WUL8 3843 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 TMEM212A6NML5 194 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 M0QYG6 137 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 RBBP9O75884 186 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 HCKP08631 526 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 ITGA5P08648 1049 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 ANXA7P20073 488 aaKnown RBP7.63□□□□□ -1.19
VPS4B-201ENST00000238497 DAP3P51398 398 aaKnown RBP7.63□□□□□ -1.19
VPS4B-201ENST00000238497 SLC25A1P53007 311 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 WIPI1Q5MNZ9 446 aaPredicted RBP7.63□□□□□ -1.19
VPS4B-201ENST00000238497 TRILQ7L0X0 811 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 KCTD20Q7Z5Y7 419 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 NOXA1Q86UR1 476 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 NAA40Q86UY6 237 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 MAP6Q96JE9 813 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 GFI1Q99684 422 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 GINS4Q9BRT9 223 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 EIF3KQ9UBQ5 218 aaKnown RBP7.63□□□□□ -1.19
VPS4B-201ENST00000238497 E9PLN8 166 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 CDK2AP1O14519 115 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 SIX6O95475 246 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 CLDN14O95500 239 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 LAP3P28838 519 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 RASGEF1BQ0VAM2 473 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 FOXO1Q12778 655 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 RAB11BQ15907 218 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 C3orf33Q6P1S2 294 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 TMEM53Q6P2H8 277 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 SLC26A10Q8NG04 563 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 OR8H1Q8NGG4 311 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 OR52B4Q8NGK2 314 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 OR52N5Q8NH56 324 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 OR56B4Q8NH76 319 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 FAM3DQ96BQ1 224 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 KCTD12Q96CX2 325 aaKnown RBP7.63□□□□□ -1.19
VPS4B-201ENST00000238497 SLAMF6Q96DU3 332 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 VKORC1Q9BQB6 163 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 EVA1AQ9H8M9 152 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 HHLA2Q9UM44 414 aa7.63□□□□□ -1.19
VPS4B-201ENST00000238497 TACC2O95359 2948 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 LRBAP50851 2863 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 MAP1AP78559 2803 aaPredicted RBP7.62□□□□□ -1.19
VPS4B-201ENST00000238497 TRAV1-2A0A0B4J238 106 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 NKX2-6A6NCS4 301 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 WIPF3A6NGB9 483 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF20P17024 532 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 CXCL3P19876 107 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 EMC4Q5J8M3 183 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 TMEM255AQ5JRV8 349 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 UBE2NLQ5JXB2 153 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 TMEM211Q6ICI0 200 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 DND1Q8IYX4 353 aaKnown RBP7.62□□□□□ -1.19
VPS4B-201ENST00000238497 C17orf50Q8WW18 174 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 TMEM41AQ96HV5 264 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 RABL2BQ9UNT1 228 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 A0A1W2PQD3 144 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 HTR3EA5X5Y0 456 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 LIPT2A6NK58 231 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 FAM25EA8MYX2 175 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 TO15178 435 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 IGHG1P01857 330 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 YES1P07947 543 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 STOMP27105 288 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 TAS2R20P59543 309 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 RRAS2P62070 204 aaPredicted RBP7.62□□□□□ -1.19
VPS4B-201ENST00000238497 MAB21L1Q13394 359 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 GGTLC2Q14390 218 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 PLPPR5Q32ZL2 321 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 C4orf46Q504U0 113 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 LYPD8Q6UX82 237 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 PLCZ1Q86YW0 608 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 WDSUB1Q8N9V3 476 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 ST8SIA1Q92185 356 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 MS4A3Q96HJ5 214 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms